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Lj5g3v0615020.1

Overview

Field Value
Gene ID Lj5g3v0615020
Transcript ID Lj5g3v0615020.1
Lotus japonicus genome version MG20 v3.0
Description Uncharacterized protein isoform 2 [Theobroma cacao] gi|508715731|gb|EOY07628.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
MobiDBLite 1 115 115
PANTHER 35 916 882 6.30E-288
PANTHER 35 916 882 6.30E-288
Pfam 52 70 19 1.00E-06
Pfam 153 196 44 3.80E-20
MobiDBLite 249 272 24
MobiDBLite 382 431 50
MobiDBLite 644 696 53
Coils 714 734 21
Pfam 766 915 150 8.20E-27

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

Unable to find any GO terms for the transcript with the identifier.

Expression data

Expression pattern

Expression pattern of Lj5g3v0615020.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj5g3v0615020.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.