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| Field | Value |
|---|---|
| Gene ID | Lj5g3v0670630 |
| Transcript ID | Lj5g3v0670630.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: phosphatidylinositol-4-phosphate 5-kinase 9-like [Glycine max] gi|356533289|ref|XP_003535198.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PIRSF | 9 | 829 | 821 | 0 | ||
| PANTHER | 13 | 692 | 680 | 0 | ||
| PANTHER | 13 | 692 | 680 | 0 | – | |
| Gene3D | 53 | 161 | 109 | 1.90E-28 | – | |
| SUPERFAMILY | 58 | 185 | 128 | 4.58E-31 | – | |
| SMART | 61 | 82 | 22 | 0.4 | ||
| Pfam | 63 | 85 | 23 | 0.0068 | ||
| SMART | 84 | 105 | 22 | 3.40E-05 | ||
| Pfam | 86 | 107 | 22 | 6.80E-07 | ||
| SMART | 107 | 128 | 22 | 0.088 | ||
| Pfam | 109 | 128 | 20 | 0.0081 | ||
| SMART | 130 | 151 | 22 | 0.12 | ||
| Pfam | 132 | 153 | 22 | 9.20E-05 | ||
| SMART | 153 | 174 | 22 | 0.85 | ||
| Pfam | 155 | 177 | 23 | 7.80E-06 | ||
| Gene3D | 162 | 242 | 81 | 8.60E-27 | – | |
| SUPERFAMILY | 172 | 243 | 72 | 6.15E-19 | – | |
| SMART | 176 | 197 | 22 | 0.26 | ||
| Pfam | 178 | 199 | 22 | 0.0083 | ||
| SMART | 199 | 220 | 22 | 1.10E-05 | ||
| Pfam | 201 | 222 | 22 | 5.70E-08 | ||
| SMART | 222 | 243 | 22 | 0.18 | ||
| Pfam | 224 | 244 | 21 | 0.0028 | ||
| Coils | 379 | 399 | 21 | – | – | |
| Gene3D | 399 | 578 | 180 | 4.40E-68 | ||
| SUPERFAMILY | 406 | 676 | 271 | 1.31E-116 | – | |
| ProSiteProfiles | 407 | 825 | 419 | 70.339 | ||
| SMART | 437 | 826 | 390 | 1.10E-160 | ||
| Pfam | 498 | 823 | 326 | 4.00E-92 | ||
| Gene3D | 579 | 676 | 98 | 5.30E-47 | ||
| PANTHER | 727 | 829 | 103 | 0 | ||
| PANTHER | 727 | 829 | 103 | 0 | – | |
| SUPERFAMILY | 744 | 825 | 82 | 1.31E-116 | – | |
| Gene3D | 752 | 825 | 74 | 5.30E-47 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Molecular function | Phosphatidylinositol phosphate kinase activity | Catalysis of the reaction: ATP + a phosphatidylinositol phosphate = ADP + a phosphatidylinositol bisphosphate. | ||
| Molecular function | 1-phosphatidylinositol-4-phosphate 5-kinase activity | Catalysis of the reaction: 1-phosphatidyl-1D-myo-inositol 4-phosphate + ATP = 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate + ADP + 2 H(+). | ||
| Biological process | Phosphatidylinositol metabolic process | The chemical reactions and pathways involving phosphatidylinositol, any glycophospholipid in which a sn-glycerol 3-phosphate residue is esterified to the 1-hydroxyl group of 1D-myo-inositol. |
Expression pattern of Lj5g3v0670630.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj5g3v0670630.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.