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| Field | Value |
|---|---|
| Gene ID | Lj5g3v1062480 |
| Transcript ID | Lj5g3v1062480.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: autophagy-related protein 9-like [Cicer arietinum] gi|502115030|ref|XP_004495109.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 528 | 528 | 0 | ||
| Phobius | 1 | 84 | 84 | – | – | |
| PANTHER | 1 | 528 | 528 | 0 | – | |
| Phobius | 85 | 112 | 28 | – | – | |
| TMHMM | 88 | 110 | 23 | – | – | |
| Phobius | 113 | 154 | 42 | – | – | |
| Phobius | 155 | 177 | 23 | – | – | |
| TMHMM | 155 | 177 | 23 | – | – | |
| Phobius | 178 | 241 | 64 | – | – | |
| Pfam | 198 | 528 | 331 | 3.50E-112 | ||
| TMHMM | 241 | 263 | 23 | – | – | |
| Phobius | 242 | 259 | 18 | – | – | |
| Phobius | 260 | 278 | 19 | – | – | |
| TMHMM | 278 | 297 | 20 | – | – | |
| Phobius | 279 | 297 | 19 | – | – | |
| Phobius | 298 | 317 | 20 | – | – | |
| TMHMM | 318 | 340 | 23 | – | – | |
| Phobius | 318 | 342 | 25 | – | – | |
| Phobius | 343 | 399 | 57 | – | – | |
| Phobius | 400 | 426 | 27 | – | – | |
| TMHMM | 403 | 425 | 23 | – | – | |
| Phobius | 427 | 437 | 11 | – | – | |
| TMHMM | 438 | 457 | 20 | – | – | |
| Phobius | 438 | 457 | 20 | – | – | |
| Phobius | 458 | 511 | 54 | – | – | |
| Phobius | 512 | 531 | 20 | – | – | |
| TMHMM | 513 | 532 | 20 | – | – | |
| Phobius | 532 | 533 | 2 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Autophagy | The cellular catabolic process in which cells digest parts of their own cytoplasm; allows for both recycling of macromolecular constituents under conditions of cellular stress and remodeling the intracellular structure for cell differentiation. |
Expression pattern of Lj5g3v1062480.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj5g3v1062480.1, powered by CORGI.
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