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| Field | Value |
|---|---|
| Gene ID | Lj5g3v1145280 |
| Transcript ID | Lj5g3v1145280.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: auxin-induced protein 5NG4 [Glycine max] gi|356535430|ref|XP_003536248.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 14 | 14 | – | – | |
| PANTHER | 5 | 327 | 323 | 1.20E-215 | ||
| PANTHER | 5 | 327 | 323 | 1.20E-215 | – | |
| TMHMM | 15 | 34 | 20 | – | – | |
| Phobius | 15 | 34 | 20 | – | – | |
| Pfam | 21 | 157 | 137 | 5.90E-07 | ||
| Phobius | 35 | 45 | 11 | – | – | |
| Phobius | 46 | 67 | 22 | – | – | |
| TMHMM | 47 | 66 | 20 | – | – | |
| SUPERFAMILY | 51 | 160 | 110 | 5.75E-07 | – | |
| Phobius | 68 | 78 | 11 | – | – | |
| TMHMM | 76 | 98 | 23 | – | – | |
| Phobius | 79 | 99 | 21 | – | – | |
| Phobius | 100 | 104 | 5 | – | – | |
| Phobius | 105 | 127 | 23 | – | – | |
| TMHMM | 105 | 127 | 23 | – | – | |
| Phobius | 128 | 138 | 11 | – | – | |
| TMHMM | 137 | 159 | 23 | – | – | |
| Phobius | 139 | 159 | 21 | – | – | |
| Phobius | 160 | 184 | 25 | – | – | |
| Phobius | 185 | 205 | 21 | – | – | |
| Pfam | 187 | 325 | 139 | 2.10E-13 | ||
| Phobius | 206 | 216 | 11 | – | – | |
| TMHMM | 215 | 237 | 23 | – | – | |
| Phobius | 217 | 238 | 22 | – | – | |
| Phobius | 239 | 252 | 14 | – | – | |
| SUPERFAMILY | 249 | 327 | 79 | 5.10E-06 | – | |
| TMHMM | 252 | 274 | 23 | – | – | |
| Phobius | 253 | 274 | 22 | – | – | |
| Phobius | 275 | 280 | 6 | – | – | |
| Phobius | 281 | 301 | 21 | – | – | |
| TMHMM | 281 | 303 | 23 | – | – | |
| Phobius | 302 | 306 | 5 | – | – | |
| Phobius | 307 | 326 | 20 | – | – | |
| TMHMM | 307 | 326 | 20 | – | – | |
| Phobius | 327 | 327 | 1 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. |
Expression pattern of Lj5g3v1145280.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj5g3v1145280.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.