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Lj5g3v1145290.1

Overview

Field Value
Gene ID Lj5g3v1145290
Transcript ID Lj5g3v1145290.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: electron transfer flavoprotein subunit beta, mitochondrial-like [Glycine max] gi|356535428|ref|XP_003536247.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
SUPERFAMILY 1 244 244 2.02E-81
PANTHER 1 251 251 2.40E-168
PIRSF 1 251 251 5.30E-85
PANTHER 1 251 251 2.40E-168
Gene3D 1 246 246 3.50E-102
CDD 2 205 204 3.27E-87
SMART 23 213 191 1.80E-64
Pfam 26 208 183 1.00E-43
ProSitePatterns 157 177 21

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Molecular function Electron transfer activity Any molecular entity that serves as an electron acceptor and electron donor in an electron transport chain. An electron transport chain is a process in which a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient.

Expression data

Expression pattern

Expression pattern of Lj5g3v1145290.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj5g3v1145290.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.