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| Field | Value |
|---|---|
| Gene ID | Lj5g3v1188070 |
| Transcript ID | Lj5g3v1188070.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit alpha-like [Glycine max] gi|356535380|ref|XP_003536224.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 8 | 539 | 532 | 0 | – | |
| PANTHER | 8 | 539 | 532 | 0 | – | |
| MobiDBLite | 81 | 117 | 37 | – | – | |
| Gene3D | 165 | 212 | 48 | 2.10E-05 | ||
| SUPERFAMILY | 169 | 293 | 125 | 1.57E-13 | ||
| ProSiteProfiles | 185 | 213 | 29 | 5.615 | ||
| Gene3D | 257 | 293 | 37 | 2.10E-05 | ||
| ProSiteProfiles | 265 | 300 | 36 | 5.42 | ||
| SUPERFAMILY | 305 | 460 | 156 | 1.11E-23 | ||
| Gene3D | 315 | 460 | 146 | 1.10E-13 | ||
| Pfam | 320 | 421 | 102 | 6.50E-17 | ||
| ProSiteProfiles | 391 | 426 | 36 | 9.548 | ||
| ProSitePatterns | 404 | 416 | 13 | – | ||
| MobiDBLite | 519 | 539 | 21 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Calcium ion binding | Interacting selectively and non-covalently with calcium ions (Ca2+). |
Expression pattern of Lj5g3v1188070.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj5g3v1188070.1, powered by CORGI.
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