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| Field | Value |
|---|---|
| Gene ID | Lj5g3v1249840 |
| Transcript ID | Lj5g3v1249840.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: LOW QUALITY PROTEIN: metal-nicotianamine transporter YSL1-like [Cicer arietinum] gi|502116593|ref|XP_004495506.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 669 | 669 | 0 | – | |
| PANTHER | 1 | 669 | 669 | 0 | – | |
| Phobius | 1 | 42 | 42 | – | – | |
| Coils | 8 | 28 | 21 | – | – | |
| TIGRFAM | 38 | 654 | 617 | 1.30E-128 | ||
| Pfam | 42 | 653 | 612 | 2.90E-138 | ||
| Phobius | 43 | 65 | 23 | – | – | |
| TMHMM | 44 | 63 | 20 | – | – | |
| Phobius | 66 | 70 | 5 | – | – | |
| TMHMM | 68 | 90 | 23 | – | – | |
| Phobius | 71 | 90 | 20 | – | – | |
| Phobius | 91 | 110 | 20 | – | – | |
| Phobius | 111 | 133 | 23 | – | – | |
| TMHMM | 111 | 133 | 23 | – | – | |
| Phobius | 134 | 159 | 26 | – | – | |
| TMHMM | 159 | 181 | 23 | – | – | |
| Phobius | 160 | 181 | 22 | – | – | |
| Phobius | 182 | 220 | 39 | – | – | |
| Phobius | 221 | 238 | 18 | – | – | |
| Phobius | 239 | 268 | 30 | – | – | |
| Phobius | 269 | 299 | 31 | – | – | |
| TMHMM | 277 | 299 | 23 | – | – | |
| Phobius | 300 | 319 | 20 | – | – | |
| Phobius | 320 | 339 | 20 | – | – | |
| TMHMM | 329 | 351 | 23 | – | – | |
| Phobius | 340 | 383 | 44 | – | – | |
| Phobius | 384 | 404 | 21 | – | – | |
| TMHMM | 386 | 408 | 23 | – | – | |
| Phobius | 405 | 410 | 6 | – | – | |
| Phobius | 411 | 433 | 23 | – | – | |
| TMHMM | 413 | 435 | 23 | – | – | |
| Phobius | 434 | 462 | 29 | – | – | |
| TMHMM | 462 | 484 | 23 | – | – | |
| Phobius | 463 | 487 | 25 | – | – | |
| Phobius | 488 | 498 | 11 | – | – | |
| TMHMM | 499 | 521 | 23 | – | – | |
| Phobius | 499 | 523 | 25 | – | – | |
| Phobius | 524 | 559 | 36 | – | – | |
| Phobius | 560 | 578 | 19 | – | – | |
| Phobius | 579 | 597 | 19 | – | – | |
| TMHMM | 597 | 619 | 23 | – | – | |
| Phobius | 598 | 620 | 23 | – | – | |
| Phobius | 621 | 631 | 11 | – | – | |
| Phobius | 632 | 656 | 25 | – | – | |
| TMHMM | 634 | 656 | 23 | – | – | |
| Phobius | 657 | 669 | 13 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj5g3v1249840.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj5g3v1249840.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.