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| Field | Value |
|---|---|
| Gene ID | Lj5g3v1356080 |
| Transcript ID | Lj5g3v1356080.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Dihydroorotase [Medicago truncatula] gi|357474373|ref|XP_003607471.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 282 | 282 | 1.90E-167 | – | |
| Gene3D | 1 | 305 | 305 | 2.60E-116 | – | |
| CDD | 1 | 304 | 304 | 0 | ||
| TIGRFAM | 1 | 305 | 305 | 3.90E-124 | ||
| PIRSF | 1 | 308 | 308 | 8.10E-128 | ||
| PANTHER | 1 | 282 | 282 | 1.90E-167 | ||
| SUPERFAMILY | 1 | 305 | 305 | 1.13E-123 | ||
| Pfam | 2 | 270 | 269 | 3.50E-18 | ||
| ProSitePatterns | 209 | 220 | 12 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Dihydroorotase activity | Catalysis of the reaction: (S)-dihydroorotate + H(2)O = N-carbamoyl-L-aspartate + H(+). | ||
| Molecular function | Hydrolase activity | Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3. | ||
| Molecular function | Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides | Catalysis of the hydrolysis of any non-peptide carbon-nitrogen bond in a cyclic amide. | ||
| Biological process | Pyrimidine nucleobase biosynthetic process | The chemical reactions and pathways resulting in the formation of pyrimidine nucleobases, 1,3-diazine, organic nitrogenous bases. |
Expression pattern of Lj5g3v1356080.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj5g3v1356080.1, powered by CORGI.
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