Domain Predictions — View

Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

PF01979

Source: Pfam

Description

Amidohydrolase family

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on April 27, 2020, while the GO metadata was last updated on April 27, 2020.

GO term	Namespace	Name	Definition	Relationships
GO:0016787 View details of GO:0016787 AmiGO InterPro QuickGO	Molecular function	Hydrolase activity	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3.	Subterm of GO:0003824

Associated Lotus transcripts 30

Transcript	Name	Description	Predicted domains	Domain count
Lj0g3v0277589.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Dihydroorotase [Medicago truncatula] gi\|357474373\|ref\|XP_003607471.1\|	Domains G3DSA:3.20.20.140 IPR002195 IPR004721 IPR006680 IPR032466 PF01979 PS00483 PTHR11647 PTHR11647:SF59 SSF51556 TIGR00856	11
Lj0g3v0297889.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: 5-methylthioadenosine/S-adenosylhomocysteine deaminase-like isoform X1 [Cicer arietinum] gi\|502121742\|ref\|XP_004497426.1\|	Domains CYTOPLASMIC_DOMAIN G3DSA:2.30.40.10 G3DSA:3.20.20.140 IPR006680 IPR011059 IPR032466 NON_CYTOPLASMIC_DOMAIN PF01979 PTHR11271 PTHR11271:SF7 SSF51338 SSF51556 TMhelix TRANSMEMBRANE	14
Lj0g3v0297889.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: 5-methylthioadenosine/S-adenosylhomocysteine deaminase-like isoform X1 [Cicer arietinum] gi\|502121742\|ref\|XP_004497426.1\|	Domains G3DSA:2.30.40.10 G3DSA:3.20.20.140 IPR006680 IPR011059 IPR032466 PF01979 PTHR11271 PTHR11271:SF7 SSF51338 SSF51556 cd01298	11
Lj0g3v0308359.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: urease-like [Cicer arietinum] gi\|502135386\|ref\|XP_004502315.1\|	Domains G3DSA:2.10.150.10 G3DSA:2.30.40.10 G3DSA:3.20.20.140 G3DSA:3.30.280.10 IPR002019 IPR002026 IPR005848 IPR006680 IPR011059 IPR011612 IPR017950 IPR017951 IPR032466 MF_01953 PD002319 PF00449 PF00547 PF00699 PF01979 PR01752 PS00145 PS51368 PTHR22642 PTHR22642:SF7 SSF51278 SSF51338 SSF51556 SSF54111 TIGR00192 TIGR00193 TIGR01792 cd00375 cd00390 cd00407	34
Lj2g3v3008590.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: dihydropyrimidinase-like isoform X1 [Cicer arietinum] gi\|502098432\|ref\|XP_004491233.1\|	Domains G3DSA:2.30.40.10 G3DSA:3.20.20.140 IPR006680 IPR011059 IPR032466 NON_CYTOPLASMIC_DOMAIN PF01979 PTHR11647 PTHR11647:SF1 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF51338 SSF51556 SignalP-noTM_EUK TMhelix	17
Lj2g3v3021710.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: dihydropyrimidinase-like isoform X1 [Cicer arietinum] gi\|502098432\|ref\|XP_004491233.1\|	Domains G3DSA:2.30.40.10 G3DSA:3.20.20.140 IPR006680 IPR011059 IPR032466 NON_CYTOPLASMIC_DOMAIN PF01979 PTHR11647 PTHR11647:SF1 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF51338 SSF51556 SignalP-TM_GRAM_POSITIVE SignalP-noTM_EUK SignalP-noTM_GRAM_NEGATIVE	18
Lj2g3v3022760.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: dihydropyrimidinase-like isoform X1 [Cicer arietinum] gi\|502098432\|ref\|XP_004491233.1\|	Domains G3DSA:2.30.40.10 G3DSA:3.20.20.140 IPR006680 IPR011059 IPR011778 IPR032466 NON_CYTOPLASMIC_DOMAIN PF01979 PTHR11647 PTHR11647:SF1 SFLDF00069 SFLDF00072 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF51338 SSF51556 SignalP-TM_EUK SignalP-TM_GRAM_POSITIVE TIGR02033 TMhelix cd01314	23
Lj5g3v1351990.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Dihydroorotase [Medicago truncatula] gi\|357474373\|ref\|XP_003607471.1\|	Domains G3DSA:3.20.20.140 IPR002195 IPR004721 IPR006680 IPR032466 PF01979 PS00483 PTHR11647 PTHR11647:SF59 SSF51556	10
Lj5g3v1356080.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Dihydroorotase [Medicago truncatula] gi\|357474373\|ref\|XP_003607471.1\|	Domains G3DSA:3.20.20.140 IPR002195 IPR004721 IPR006680 IPR032466 PF01979 PIRSF001237 PS00483 PTHR11647 PTHR11647:SF59 SSF51556 TIGR00856 cd01294	13
Lj6g3v2043160.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Allantoinase [Robinia pseudoacacia] gi\|39653353\|gb\|AAR29343.1\|	Domains CYTOPLASMIC_DOMAIN G3DSA:2.30.40.10 G3DSA:3.20.20.140 IPR006680 IPR011059 IPR017593 IPR032466 NON_CYTOPLASMIC_DOMAIN PF01979 PTHR11647 PTHR11647:SF4 SFLDF00058 SFLDF00069 SFLDF00072 SSF51338 SSF51556 TIGR03178 TMhelix TRANSMEMBRANE	19
Lj6g3v2043160.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Allantoinase [Robinia pseudoacacia] gi\|39653353\|gb\|AAR29343.1\|	Domains CYTOPLASMIC_DOMAIN G3DSA:2.30.40.10 G3DSA:3.20.20.140 IPR006680 IPR011059 IPR032466 NON_CYTOPLASMIC_DOMAIN PF01979 PTHR11647 PTHR11647:SF4 SSF51338 SSF51556 TMhelix TRANSMEMBRANE	14
LotjaGi1g1v0051700.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Dihydropyrimidinase; TAIR: AT5G12200.1 pyrimidine 2; Swiss-Prot: sp\|Q9FMP3\|DPYS_ARATH Dihydropyrimidinase; TrEMBL-Plants: tr\|G7K315\|G7K315_MEDTR Dihydropyrimidinase; Found in the gene: LotjaGi1g1v0051700	Domains G3DSA:2.30.40.10 G3DSA:3.20.20.140 IPR006680 IPR011059 IPR011778 IPR032466 NON_CYTOPLASMIC_DOMAIN PF01979 PTHR11647 PTHR11647:SF1 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF51338 SSF51556 SignalP-TM TIGR02033 TMhelix cd01314	20
LotjaGi1g1v0051700.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Dihydropyrimidinase; TAIR: AT5G12200.1 pyrimidine 2; Swiss-Prot: sp\|Q9FMP3\|DPYS_ARATH Dihydropyrimidinase; TrEMBL-Plants: tr\|G7K315\|G7K315_MEDTR Dihydropyrimidinase; Found in the gene: LotjaGi1g1v0051700	Domains G3DSA:2.30.40.10 G3DSA:3.20.20.140 IPR006680 IPR011059 IPR011778 IPR032466 NON_CYTOPLASMIC_DOMAIN PF01979 PTHR11647 PTHR11647:SF1 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF51338 SSF51556 SignalP-TM TIGR02033 TMhelix cd01314	20
LotjaGi1g1v0051700.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Dihydropyrimidinase; TAIR: AT5G12200.1 pyrimidine 2; Swiss-Prot: sp\|Q9FMP3\|DPYS_ARATH Dihydropyrimidinase; TrEMBL-Plants: tr\|A0A151T7P5\|A0A151T7P5_CAJCA Dihydropyrimidinase; Found in the gene: LotjaGi1g1v0051700	Domains G3DSA:2.30.40.10 G3DSA:3.20.20.140 IPR006680 IPR011059 IPR011778 IPR032466 PF01979 PTHR11647 PTHR11647:SF1 SSF51338 SSF51556 TIGR02033 cd01314	13
LotjaGi1g1v0051700.4 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Dihydropyrimidinase; TAIR: AT5G12200.1 pyrimidine 2; Swiss-Prot: sp\|Q9FMP3\|DPYS_ARATH Dihydropyrimidinase; TrEMBL-Plants: tr\|A0A151T7P5\|A0A151T7P5_CAJCA Dihydropyrimidinase; Found in the gene: LotjaGi1g1v0051700	Domains G3DSA:2.30.40.10 G3DSA:3.20.20.140 IPR006680 IPR011059 IPR011778 IPR032466 PF01979 PTHR11647 PTHR11647:SF1 SSF51338 SSF51556 TIGR02033 cd01314	13
LotjaGi1g1v0051700.5 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Dihydropyrimidinase; TAIR: AT5G12200.1 pyrimidine 2; Swiss-Prot: sp\|Q9FMP3\|DPYS_ARATH Dihydropyrimidinase; TrEMBL-Plants: tr\|G7K315\|G7K315_MEDTR Dihydropyrimidinase; Found in the gene: LotjaGi1g1v0051700	Domains G3DSA:2.30.40.10 G3DSA:3.20.20.140 IPR006680 IPR011059 IPR011778 IPR032466 PF01979 PTHR11647 PTHR11647:SF1 SSF51338 SSF51556 TIGR02033 cd01314	13
LotjaGi1g1v0051700.6 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Dihydropyrimidinase; TAIR: AT5G12200.1 pyrimidine 2; Swiss-Prot: sp\|Q9FMP3\|DPYS_ARATH Dihydropyrimidinase; TrEMBL-Plants: tr\|A0A151T7P5\|A0A151T7P5_CAJCA Dihydropyrimidinase; Found in the gene: LotjaGi1g1v0051700	Domains G3DSA:2.30.40.10 G3DSA:3.20.20.140 IPR006680 IPR011059 IPR011778 IPR032466 PF01979 PTHR11647 PTHR11647:SF1 SSF51338 SSF51556 TIGR02033 cd01314	13
LotjaGi1g1v0051800.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Dihydropyrimidinase; TAIR: AT5G12200.1 pyrimidine 2; Swiss-Prot: sp\|Q9FMP3\|DPYS_ARATH Dihydropyrimidinase; TrEMBL-Plants: tr\|G7KCW0\|G7KCW0_MEDTR Dihydropyrimidinase; Found in the gene: LotjaGi1g1v0051800	Domains G3DSA:2.30.40.10 G3DSA:3.20.20.140 IPR006680 IPR011059 IPR011778 IPR032466 NON_CYTOPLASMIC_DOMAIN PF01979 PTHR11647 PTHR11647:SF1 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF51338 SSF51556 SignalP-noTM TIGR02033 cd01314	19
LotjaGi3g1v0453100.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Dihydroorotase; TAIR: AT4G22930.1 pyrimidin 4; Swiss-Prot: sp\|O04904\|PYRC_ARATH Dihydroorotase, mitochondrial; TrEMBL-Plants: tr\|A0A0R0JV11\|A0A0R0JV11_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0453100	Domains G3DSA:3.20.20.140 IPR002195 IPR004721 IPR006680 IPR032466 MF_00219 PF01979 PIRSF001237 PS00483 PTHR43137 PTHR43137:SF2 SSF51556 TIGR00856 cd01294	14
LotjaGi3g1v0453100.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Dihydroorotase; TAIR: AT4G22930.1 pyrimidin 4; Swiss-Prot: sp\|O04904\|PYRC_ARATH Dihydroorotase, mitochondrial; TrEMBL-Plants: tr\|A0A0R0JV11\|A0A0R0JV11_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0453100	Domains G3DSA:3.20.20.140 IPR002195 IPR004721 IPR006680 IPR032466 MF_00219 PF01979 PIRSF001237 PS00483 PTHR43137 PTHR43137:SF2 SSF51556 TIGR00856 cd01294	14
LotjaGi3g1v0453100.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Dihydroorotase; TAIR: AT4G22930.1 pyrimidin 4; Swiss-Prot: sp\|O04904\|PYRC_ARATH Dihydroorotase, mitochondrial; TrEMBL-Plants: tr\|A0A0R0JV11\|A0A0R0JV11_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0453100	Domains G3DSA:3.20.20.140 IPR002195 IPR004721 IPR006680 IPR032466 MF_00219 PF01979 PIRSF001237 PS00483 PTHR43137 PTHR43137:SF2 SSF51556 TIGR00856 cd01294	14
LotjaGi3g1v0453100.4 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Dihydroorotase; TAIR: AT4G22930.1 pyrimidin 4; Swiss-Prot: sp\|O04904\|PYRC_ARATH Dihydroorotase, mitochondrial; TrEMBL-Plants: tr\|A0A0R0JV11\|A0A0R0JV11_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0453100	Domains G3DSA:3.20.20.140 IPR002195 IPR004721 IPR006680 IPR032466 MF_00219 PF01979 PIRSF001237 PS00483 PTHR43137 PTHR43137:SF2 SSF51556 TIGR00856 cd01294	14
LotjaGi5g1v0208000.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Dihydroorotase; TAIR: AT4G22930.1 pyrimidin 4; Swiss-Prot: sp\|O04904\|PYRC_ARATH Dihydroorotase, mitochondrial; TrEMBL-Plants: tr\|A0A0R0JV11\|A0A0R0JV11_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0208000	Domains G3DSA:3.20.20.140 IPR002195 IPR004721 IPR006680 IPR032466 MF_00219 PF01979 PIRSF001237 PS00483 PTHR43137 PTHR43137:SF2 SSF51556 TIGR00856 cd01294	14
LotjaGi5g1v0208000.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Dihydroorotase; TAIR: AT4G22930.1 pyrimidin 4; Swiss-Prot: sp\|O04904\|PYRC_ARATH Dihydroorotase, mitochondrial; TrEMBL-Plants: tr\|A0A1J7HZ13\|A0A1J7HZ13_LUPAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0208000	Domains G3DSA:3.20.20.140 IPR002195 IPR004721 IPR006680 IPR032466 PF01979 PS00483 PTHR43137 PTHR43137:SF2 SSF51556 SignalP-noTM TIGR00856	12
LotjaGi5g1v0208000.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Dihydroorotase; TAIR: AT4G22930.1 pyrimidin 4; Swiss-Prot: sp\|O04904\|PYRC_ARATH Dihydroorotase, mitochondrial; TrEMBL-Plants: tr\|A0A0R0JV11\|A0A0R0JV11_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0208000	Domains G3DSA:3.20.20.140 IPR002195 IPR004721 IPR006680 IPR032466 MF_00219 PF01979 PIRSF001237 PS00483 PTHR43137 PTHR43137:SF2 SSF51556 TIGR00856 cd01294	14
LotjaGi5g1v0331900.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	5-methylthioadenosine/S-adenosylhomocysteine deaminase; TAIR: AT3G55850.3 Amidohydrolase family; Swiss-Prot: sp\|A5UMN6\|DADD_METS3 5'-deoxyadenosine deaminase; TrEMBL-Plants: tr\|I1NJF1\|I1NJF1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0331900	Domains G3DSA:2.30.40.10 G3DSA:3.20.20.140 IPR006680 IPR011059 IPR032466 PF01979 PTHR43794 PTHR43794:SF11 SSF51338 SSF51556 cd01298	11
LotjaGi6g1v0101300.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Urease subunit alpha; TAIR: AT1G67550.1 urease; Swiss-Prot: sp\|P07374\|UREA_CANEN Urease; TrEMBL-Plants: tr\|Q949H4\|Q949H4_SOYBN Urease; Found in the gene: LotjaGi6g1v0101300	Domains G3DSA:2.10.150.10 G3DSA:2.30.40.10 G3DSA:3.20.20.140 G3DSA:3.30.280.10 IPR002019 IPR002026 IPR005848 IPR006680 IPR008221 IPR011059 IPR011612 IPR017950 IPR017951 IPR032466 IPR036461 IPR036463 IPR040881 MF_01953 PF00449 PF00547 PF00699 PF01979 PF18473 PIRSF001222 PR01752 PS00145 PS51368 PTHR33569 SSF51278 SSF51338 SSF51556 SSF54111 TIGR00192 TIGR00193 TIGR01792 cd00375 cd00390 cd00407	38
LotjaGi6g1v0101300.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Urease subunit alpha; TAIR: AT1G67550.1 urease; Swiss-Prot: sp\|P07374\|UREA_CANEN Urease; TrEMBL-Plants: tr\|Q949H4\|Q949H4_SOYBN Urease; Found in the gene: LotjaGi6g1v0101300	Domains G3DSA:2.10.150.10 G3DSA:2.30.40.10 G3DSA:3.20.20.140 IPR002019 IPR005848 IPR006680 IPR011059 IPR011612 IPR017950 IPR017951 IPR032466 IPR036461 IPR040881 MF_01953 NON_CYTOPLASMIC_DOMAIN PF00449 PF00699 PF01979 PF18473 PR01752 PS00145 PS51368 PTHR33569 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF51278 SSF51338 SSF51556 TIGR00192 cd00375 cd00407	33
LotjaGi6g1v0101300.3 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Urease subunit alpha; TAIR: AT1G67550.1 urease; Swiss-Prot: sp\|P07374\|UREA_CANEN Urease; TrEMBL-Plants: tr\|Q949H4\|Q949H4_SOYBN Urease; Found in the gene: LotjaGi6g1v0101300	Domains G3DSA:2.10.150.10 G3DSA:2.30.40.10 G3DSA:3.20.20.140 IPR002019 IPR005848 IPR006680 IPR011059 IPR011612 IPR017950 IPR017951 IPR032466 IPR036461 IPR040881 MF_01953 PF00449 PF00699 PF01979 PF18473 PR01752 PS00145 PS51368 PTHR33569 SSF51278 SSF51338 SSF51556 TIGR00192 TIGR01792 cd00375 cd00407	29
LotjaGi6g1v0333200.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Allantoinase; TAIR: AT4G04955.1 allantoinase; Swiss-Prot: sp\|Q94AP0\|ALN_ARATH Allantoinase; TrEMBL-Plants: tr\|Q6S4R9\|Q6S4R9_ROBPS Allantoinase; Found in the gene: LotjaGi6g1v0333200	Domains CYTOPLASMIC_DOMAIN G3DSA:3.20.20.140 IPR006680 IPR011059 IPR017593 IPR032466 NON_CYTOPLASMIC_DOMAIN PF01979 PTHR43668 PTHR43668:SF2 SSF51338 SSF51556 TIGR03178 TMhelix TRANSMEMBRANE	15

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
TRANSMEMBRANE	Phobius	1	3.33