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Lj5g3v1430040.1

Overview

Field Value
Gene ID Lj5g3v1430040
Transcript ID Lj5g3v1430040.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: myosin-10-like [Cicer arietinum] gi|502117265|ref|XP_004495761.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
MobiDBLite 1 27 27
Phobius 1 612 612
PANTHER 88 172 85 7.40E-14
Coils 150 170 21
Coils 185 208 24
PANTHER 190 209 20 7.40E-14
Coils 269 331 63
PANTHER 270 606 337 7.40E-14
Coils 339 366 28
Coils 374 457 84
Coils 472 527 56
Coils 584 611 28
Phobius 613 634 22
TMHMM 614 633 20
Phobius 635 637 3

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

Unable to find any GO terms for the transcript with the identifier.

LORE1 insertions 4

Expression data

Expression pattern

Expression pattern of Lj5g3v1430040.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj5g3v1430040.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.