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| Field | Value |
|---|---|
| Gene ID | Lj5g3v1496730 |
| Transcript ID | Lj5g3v1496730.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Formin-like protein [Medicago truncatula] gi|357441725|ref|XP_003591140.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 11 | 11 | – | – | |
| Phobius | 12 | 33 | 22 | – | – | |
| TMHMM | 15 | 34 | 20 | – | – | |
| Phobius | 34 | 165 | 132 | – | – | |
| PANTHER | 63 | 147 | 85 | 6.20E-294 | – | |
| PANTHER | 63 | 147 | 85 | 6.20E-294 | – | |
| MobiDBLite | 109 | 159 | 51 | – | – | |
| TMHMM | 166 | 188 | 23 | – | – | |
| Phobius | 166 | 190 | 25 | – | – | |
| Phobius | 191 | 910 | 720 | – | – | |
| Coils | 227 | 247 | 21 | – | – | |
| MobiDBLite | 265 | 297 | 33 | – | – | |
| MobiDBLite | 316 | 498 | 183 | – | – | |
| PANTHER | 373 | 393 | 21 | 6.20E-294 | – | |
| PANTHER | 373 | 393 | 21 | 6.20E-294 | – | |
| PANTHER | 430 | 736 | 307 | 6.20E-294 | – | |
| PANTHER | 430 | 736 | 307 | 6.20E-294 | – | |
| ProSiteProfiles | 487 | 910 | 424 | 46.287 | ||
| SMART | 487 | 902 | 416 | 2.10E-106 | ||
| Pfam | 489 | 887 | 399 | 6.40E-106 | ||
| SUPERFAMILY | 500 | 738 | 239 | 4.45E-84 | – | |
| MobiDBLite | 542 | 563 | 22 | – | – | |
| PANTHER | 771 | 898 | 128 | 6.20E-294 | – | |
| PANTHER | 771 | 898 | 128 | 6.20E-294 | – | |
| SUPERFAMILY | 773 | 897 | 125 | 4.45E-84 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of Lj5g3v1496730.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj5g3v1496730.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.