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| Field | Value |
|---|---|
| Gene ID | Lj5g3v1530090 |
| Transcript ID | Lj5g3v1530090.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: Golgi apparatus membrane protein-like protein ECHIDNA-like [Cicer arietinum] gi|502116907|ref|XP_004495635.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 27 | 27 | – | – | |
| PANTHER | 5 | 183 | 179 | 2.10E-119 | ||
| PANTHER | 5 | 183 | 179 | 2.10E-119 | – | |
| Pfam | 13 | 152 | 140 | 5.00E-48 | ||
| Phobius | 28 | 58 | 31 | – | – | |
| TMHMM | 29 | 51 | 23 | – | – | |
| Phobius | 59 | 103 | 45 | – | – | |
| TMHMM | 103 | 125 | 23 | – | – | |
| Phobius | 104 | 125 | 22 | – | – | |
| Phobius | 126 | 130 | 5 | – | – | |
| TMHMM | 130 | 149 | 20 | – | – | |
| Phobius | 131 | 150 | 20 | – | – | |
| Phobius | 151 | 183 | 33 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
Expression pattern of Lj5g3v1530090.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj5g3v1530090.1, powered by CORGI.
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