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Lj5g3v1585220.1

Overview

Field Value
Gene ID Lj5g3v1585220
Transcript ID Lj5g3v1585220.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: probable glycerol-3-phosphate acyltransferase 2-like [Cicer arietinum] gi|502117653|ref|XP_004495891.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Phobius
NON_CYTOPLASMIC_DOMAIN
1 83 83 – –
PANTHER
PTHR15486:SF18
42 483 442 0 –
PANTHER
PTHR15486
42 483 442 0 –
Phobius
TRANSMEMBRANE
84 112 29 – –
Phobius
CYTOPLASMIC_DOMAIN
113 288 176 – –
SUPERFAMILY
SSF69593
259 547 289 8.24E-25 –
Phobius
TRANSMEMBRANE
289 311 23 – –
Phobius
NON_CYTOPLASMIC_DOMAIN
312 556 245 – –
Pfam
PF01553
335 427 93 1.40E-07
IPR002123
CDD
cd06551
339 477 139 1.10E-17 –
SMART
SM00563
343 444 102 3.40E-08
IPR002123
PANTHER
PTHR15486
504 547 44 0 –
PANTHER
PTHR15486:SF18
504 547 44 0 –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0016746
Molecular function Transferase activity, transferring acyl groups Catalysis of the transfer of an acyl group from one compound (donor) to another (acceptor).
Subterm of

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LORE1 insertions

No LORE1 insertions have been found in the genomic region that overlaps with this gene.

Expression data

Expression pattern

Expression pattern of Lj5g3v1585220.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj5g3v1585220.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.