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| Field | Value |
|---|---|
| Gene ID | Lj5g3v1598550 |
| Transcript ID | Lj5g3v1598550.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: PH-interacting protein-like [Cicer arietinum] gi|502117700|ref|XP_004495905.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 35 | 84 | 50 | 5.50E-237 | – | |
| PANTHER | 101 | 463 | 363 | 5.50E-237 | – | |
| SUPERFAMILY | 231 | 501 | 271 | 8.86E-48 | ||
| Gene3D | 232 | 506 | 275 | 1.70E-50 | ||
| SMART | 233 | 272 | 40 | 1.00E-06 | ||
| Pfam | 235 | 272 | 38 | 5.80E-07 | ||
| CDD | 236 | 501 | 266 | 5.77E-39 | – | |
| ProSiteProfiles | 240 | 434 | 195 | 31.191 | ||
| ProSiteProfiles | 240 | 281 | 42 | 13.583 | ||
| PRINTS | 259 | 273 | 15 | 7.90E-05 | ||
| SMART | 275 | 314 | 40 | 6.70E-08 | ||
| Pfam | 278 | 313 | 36 | 1.50E-06 | ||
| ProSiteProfiles | 282 | 323 | 42 | 12.48 | ||
| PRINTS | 301 | 315 | 15 | 7.90E-05 | ||
| SMART | 317 | 359 | 43 | 8.90E-06 | ||
| Pfam | 320 | 359 | 40 | 1.90E-04 | ||
| ProSiteProfiles | 324 | 368 | 45 | 11.645 | ||
| PRINTS | 346 | 360 | 15 | 7.90E-05 | ||
| MobiDBLite | 369 | 391 | 23 | – | – | |
| SMART | 386 | 425 | 40 | 0.0035 | ||
| ProSiteProfiles | 393 | 425 | 33 | 9.907 | ||
| Pfam | 395 | 425 | 31 | 0.029 | ||
| SMART | 434 | 502 | 69 | 3 | ||
| PANTHER | 488 | 507 | 20 | 5.50E-237 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj5g3v1598550.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj5g3v1598550.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.