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Lj5g3v1665200.1

Overview

Field Value
Gene ID Lj5g3v1665200
Transcript ID Lj5g3v1665200.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: BTB/POZ domain-containing protein At1g03010-like [Glycine max] gi|356500276|ref|XP_003518959.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR32370
4 633 630 0 –
PANTHER
PTHR32370:SF30
4 633 630 0 –
SUPERFAMILY
SSF54695
22 123 102 2.43E-13
IPR011333
Gene3D
G3DSA:3.30.710.10
35 123 89 5.70E-12 –
Pfam
PF00651
37 139 103 5.90E-05
IPR000210
ProSiteProfiles
PS50097
38 106 69 9.062
IPR000210
Pfam
PF03000
212 480 269 2.10E-82
IPR027356
ProSiteProfiles
PS51649
212 504 293 85.277
IPR027356
Coils
Coil
547 581 35 – –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0005515
Molecular function Protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
Subterm of

Genome browser

LORE1 insertions 31

Expression data

Expression pattern

Expression pattern of Lj5g3v1665200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj5g3v1665200.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.