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| Field | Value |
|---|---|
| Gene ID | Lj5g3v1697290 |
| Transcript ID | Lj5g3v1697290.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 8 | 121 | 114 | 8.40E-70 | – | |
| PANTHER | 8 | 121 | 114 | 8.40E-70 | – | |
| MobiDBLite | 51 | 70 | 20 | – | – | |
| MobiDBLite | 87 | 114 | 28 | – | – | |
| PANTHER | 194 | 316 | 123 | 8.40E-70 | – | |
| PANTHER | 194 | 316 | 123 | 8.40E-70 | – | |
| CDD | 237 | 297 | 61 | 8.59E-31 | ||
| Gene3D | 238 | 296 | 59 | 1.90E-30 | ||
| SMART | 238 | 301 | 64 | 9.40E-33 | ||
| ProSiteProfiles | 238 | 295 | 58 | 22.326 | ||
| SUPERFAMILY | 238 | 296 | 59 | 3.33E-22 | ||
| Pfam | 239 | 288 | 50 | 2.80E-12 | ||
| PRINTS | 239 | 250 | 12 | 1.90E-10 | ||
| PRINTS | 261 | 277 | 17 | 1.90E-10 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | DNA binding | Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid). | ||
| Molecular function | DNA-binding transcription factor activity | A protein or a member of a complex that interacts selectively and non-covalently with a specific DNA sequence (sometimes referred to as a motif) within the regulatory region of a gene to modulate transcription. Regulatory regions include promoters (proximal and distal) and enhancers. Genes are transcriptional units, and include bacterial operons. | ||
| Biological process | Regulation of transcription, DNA-templated | Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription. |
Expression pattern of Lj5g3v1697290.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj5g3v1697290.1, powered by CORGI.
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