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| Field | Value |
|---|---|
| Gene ID | Lj5g3v1697840 |
| Transcript ID | Lj5g3v1697840.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: shugoshin-1-like [Cicer arietinum] gi|502118135|ref|XP_004496118.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 241 | 241 | 1.20E-125 | – | |
| PANTHER | 1 | 241 | 241 | 1.20E-125 | – | |
| Coils | 99 | 119 | 21 | – | – | |
| Coils | 127 | 147 | 21 | – | – | |
| MobiDBLite | 165 | 212 | 48 | – | – | |
| Coils | 222 | 242 | 21 | – | – | |
| MobiDBLite | 264 | 324 | 61 | – | – | |
| PANTHER | 271 | 402 | 132 | 1.20E-125 | – | |
| PANTHER | 271 | 402 | 132 | 1.20E-125 | – | |
| MobiDBLite | 344 | 381 | 38 | – | – | |
| Pfam | 376 | 401 | 26 | 1.90E-10 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Chromosome, centromeric region | The region of a chromosome that includes the centromeric DNA and associated proteins. In monocentric chromosomes, this region corresponds to a single area of the chromosome, whereas in holocentric chromosomes, it is evenly distributed along the chromosome. | ||
| Cellular component | Nucleus | A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent. | ||
| Biological process | Meiotic chromosome segregation | The process in which genetic material, in the form of chromosomes, is organized into specific structures and then physically separated and apportioned to two or more sets during M phase of the meiotic cell cycle. |
Expression pattern of Lj5g3v1697840.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj5g3v1697840.1, powered by CORGI.
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