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| Field | Value |
|---|---|
| Gene ID | Lj5g3v1957010 |
| Transcript ID | Lj5g3v1957010.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: protein RFT1 homolog isoform X1 [Cicer arietinum] gi|502168987|ref|XP_004514510.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 37 | 37 | – | – | |
| PANTHER | 1 | 154 | 154 | 4.00E-52 | ||
| Pfam | 6 | 160 | 155 | 7.60E-37 | ||
| TMHMM | 10 | 29 | 20 | – | – | |
| Phobius | 38 | 61 | 24 | – | – | |
| TMHMM | 38 | 60 | 23 | – | – | |
| Phobius | 62 | 189 | 128 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Lipid transporter activity | Enables the directed movement of lipids into, out of or within a cell, or between cells. | ||
| Biological process | Lipid transport | The directed movement of lipids into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
Expression pattern of Lj5g3v1957010.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj5g3v1957010.1, powered by CORGI.
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