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| Field | Value |
|---|---|
| Gene ID | Lj5g3v1976470 |
| Transcript ID | Lj5g3v1976470.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: ABC transporter G family member 8-like [Glycine max] gi|356534087|ref|XP_003535589.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 322 | 322 | 1.50E-191 | – | |
| Phobius | 1 | 64 | 64 | – | – | |
| PANTHER | 1 | 322 | 322 | 1.50E-191 | – | |
| MobiDBLite | 12 | 33 | 22 | – | – | |
| Pfam | 47 | 256 | 210 | 2.30E-46 | ||
| Phobius | 65 | 86 | 22 | – | – | |
| TMHMM | 66 | 88 | 23 | – | – | |
| Phobius | 87 | 97 | 11 | – | – | |
| Phobius | 98 | 120 | 23 | – | – | |
| TMHMM | 98 | 120 | 23 | – | – | |
| Phobius | 121 | 139 | 19 | – | – | |
| Phobius | 140 | 167 | 28 | – | – | |
| TMHMM | 140 | 162 | 23 | – | – | |
| Phobius | 168 | 175 | 8 | – | – | |
| TMHMM | 175 | 197 | 23 | – | – | |
| Phobius | 176 | 198 | 23 | – | – | |
| Phobius | 199 | 203 | 5 | – | – | |
| TMHMM | 204 | 226 | 23 | – | – | |
| Phobius | 204 | 226 | 23 | – | – | |
| Phobius | 227 | 245 | 19 | – | – | |
| Phobius | 246 | 267 | 22 | – | – | |
| Phobius | 268 | 295 | 28 | – | – | |
| TMHMM | 293 | 315 | 23 | – | – | |
| Phobius | 296 | 315 | 20 | – | – | |
| Phobius | 316 | 323 | 8 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. |
Expression pattern of Lj5g3v1976470.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj5g3v1976470.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.