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| Field | Value |
|---|---|
| Gene ID | Lj5g3v1988760 |
| Transcript ID | Lj5g3v1988760.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Keratin-associated protein 5-4 [Theobroma cacao] gi|508776038|gb|EOY23294.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 100 | 100 | – | – | |
| MobiDBLite | 1 | 47 | 47 | – | – | |
| PANTHER | 69 | 444 | 376 | 3.50E-202 | – | |
| PANTHER | 69 | 444 | 376 | 3.50E-202 | – | |
| Pfam | 80 | 442 | 363 | 8.00E-114 | ||
| TMHMM | 101 | 123 | 23 | – | – | |
| Phobius | 101 | 121 | 21 | – | – | |
| Phobius | 122 | 126 | 5 | – | – | |
| TMHMM | 127 | 146 | 20 | – | – | |
| Phobius | 127 | 147 | 21 | – | – | |
| Phobius | 148 | 158 | 11 | – | – | |
| Phobius | 159 | 181 | 23 | – | – | |
| TMHMM | 159 | 181 | 23 | – | – | |
| Phobius | 182 | 271 | 90 | – | – | |
| TMHMM | 271 | 293 | 23 | – | – | |
| Phobius | 272 | 290 | 19 | – | – | |
| Phobius | 291 | 301 | 11 | – | – | |
| TMHMM | 300 | 317 | 18 | – | – | |
| Phobius | 302 | 322 | 21 | – | – | |
| Phobius | 323 | 327 | 5 | – | – | |
| Phobius | 328 | 347 | 20 | – | – | |
| TMHMM | 330 | 352 | 23 | – | – | |
| Phobius | 348 | 358 | 11 | – | – | |
| TMHMM | 359 | 381 | 23 | – | – | |
| Phobius | 359 | 381 | 23 | – | – | |
| Phobius | 382 | 413 | 32 | – | – | |
| Phobius | 414 | 441 | 28 | – | – | |
| TMHMM | 419 | 441 | 23 | – | – | |
| Phobius | 442 | 444 | 3 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of Lj5g3v1988760.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj5g3v1988760.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.