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| Field | Value |
|---|---|
| Gene ID | Lj5g3v2029550 |
| Transcript ID | Lj5g3v2029550.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Peroxidase [Medicago truncatula] gi|357444127|ref|XP_003592341.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 25 | 25 | – | – | |
| Phobius | 1 | 8 | 8 | – | – | |
| SignalP | 1 | 25 | 25 | – | – | |
| PANTHER | 9 | 323 | 315 | 1.00E-235 | – | |
| Phobius | 9 | 20 | 12 | – | – | |
| PANTHER | 9 | 323 | 315 | 1.00E-235 | – | |
| Phobius | 21 | 25 | 5 | – | – | |
| ProSiteProfiles | 26 | 322 | 297 | 75.145 | ||
| CDD | 26 | 319 | 294 | 1.58E-170 | ||
| Phobius | 26 | 327 | 302 | – | – | |
| SUPERFAMILY | 27 | 322 | 296 | 1.08E-100 | ||
| Gene3D | 32 | 176 | 145 | 9.80E-32 | – | |
| PRINTS | 36 | 55 | 20 | 1.20E-49 | ||
| Pfam | 46 | 288 | 243 | 2.20E-74 | ||
| PRINTS | 58 | 72 | 15 | 1.90E-28 | ||
| PRINTS | 60 | 80 | 21 | 1.20E-49 | ||
| PRINTS | 99 | 112 | 14 | 1.20E-49 | ||
| PRINTS | 118 | 128 | 11 | 1.20E-49 | ||
| PRINTS | 119 | 136 | 18 | 1.90E-28 | ||
| PRINTS | 137 | 152 | 16 | 1.20E-49 | ||
| PRINTS | 137 | 149 | 13 | 1.90E-28 | ||
| Gene3D | 177 | 303 | 127 | 4.20E-45 | – | |
| PRINTS | 183 | 195 | 13 | 1.20E-49 | ||
| PRINTS | 184 | 199 | 16 | 1.90E-28 | ||
| ProSitePatterns | 184 | 194 | 11 | – | ||
| PRINTS | 242 | 257 | 16 | 1.20E-49 | ||
| PRINTS | 244 | 259 | 16 | 1.90E-28 | ||
| PRINTS | 258 | 275 | 18 | 1.20E-49 | ||
| PRINTS | 298 | 311 | 14 | 1.20E-49 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Peroxidase activity | Catalysis of the reaction: donor + hydrogen peroxide = oxidized donor + 2 H2O. | ||
| Biological process | Response to oxidative stress | Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals. | ||
| Molecular function | Heme binding | Interacting selectively and non-covalently with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring. | ||
| Biological process | Hydrogen peroxide catabolic process | The chemical reactions and pathways resulting in the breakdown of hydrogen peroxide (H2O2). | ||
| Biological process | Oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |
Expression pattern of Lj5g3v2029550.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj5g3v2029550.1, powered by CORGI.
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