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| Field | Value |
|---|---|
| Gene ID | Lj5g3v2058540 |
| Transcript ID | Lj5g3v2058540.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: RAN GTPase-activating protein 2-like [Cicer arietinum] gi|502119876|ref|XP_004496765.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | 11 | 105 | 95 | 4.00E-36 | ||
| PANTHER | 64 | 108 | 45 | 4.30E-264 | – | |
| PANTHER | 64 | 108 | 45 | 4.30E-264 | – | |
| PANTHER | 157 | 197 | 41 | 4.30E-264 | – | |
| PANTHER | 157 | 197 | 41 | 4.30E-264 | – | |
| Gene3D | 160 | 552 | 393 | 1.60E-74 | ||
| SUPERFAMILY | 163 | 539 | 377 | 3.61E-67 | – | |
| PANTHER | 233 | 557 | 325 | 4.30E-264 | – | |
| PANTHER | 233 | 557 | 325 | 4.30E-264 | – | |
| SMART | 242 | 269 | 28 | 0.0062 | – | |
| Pfam | 245 | 263 | 19 | 0.078 | ||
| SMART | 270 | 297 | 28 | 8.4 | – | |
| SMART | 298 | 325 | 28 | 26 | – | |
| SMART | 326 | 353 | 28 | 3.3 | – | |
| Pfam | 353 | 376 | 24 | 0.043 | ||
| SMART | 354 | 381 | 28 | 0.21 | – | |
| SMART | 382 | 409 | 28 | 6.4 | – | |
| SMART | 411 | 438 | 28 | 3 | – | |
| Pfam | 412 | 429 | 18 | 1.1 | ||
| SMART | 439 | 466 | 28 | 1.3 | – | |
| Pfam | 440 | 461 | 22 | 0.04 | ||
| SMART | 467 | 494 | 28 | 1.6 | – | |
| Pfam | 470 | 489 | 20 | 0.0042 | ||
| SMART | 495 | 522 | 28 | 18 | – | |
| MobiDBLite | 524 | 563 | 40 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj5g3v2058540.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj5g3v2058540.1, powered by CORGI.
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