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| Field | Value |
|---|---|
| Gene ID | Lj5g3v2113480 |
| Transcript ID | Lj5g3v2113480.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Sodium:hydrogen antiporter 1 isoform 1 [Theobroma cacao] gi|508706450|gb|EOX98346.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 118 | 118 | – | – | |
| MobiDBLite | 67 | 94 | 28 | – | – | |
| PANTHER | 89 | 118 | 30 | 0 | – | |
| PANTHER | 89 | 118 | 30 | 0 | – | |
| Phobius | 119 | 141 | 23 | – | – | |
| TMHMM | 119 | 141 | 23 | – | – | |
| Phobius | 142 | 146 | 5 | – | – | |
| PANTHER | 143 | 571 | 429 | 0 | – | |
| PANTHER | 143 | 571 | 429 | 0 | – | |
| TMHMM | 146 | 168 | 23 | – | – | |
| Phobius | 147 | 168 | 22 | – | – | |
| Pfam | 158 | 513 | 356 | 5.60E-27 | ||
| Phobius | 169 | 205 | 37 | – | – | |
| Phobius | 206 | 223 | 18 | – | – | |
| Phobius | 224 | 242 | 19 | – | – | |
| Phobius | 243 | 272 | 30 | – | – | |
| TMHMM | 247 | 269 | 23 | – | – | |
| Phobius | 273 | 283 | 11 | – | – | |
| TMHMM | 284 | 303 | 20 | – | – | |
| Phobius | 284 | 302 | 19 | – | – | |
| Phobius | 303 | 324 | 22 | – | – | |
| Phobius | 325 | 343 | 19 | – | – | |
| Phobius | 344 | 367 | 24 | – | – | |
| TMHMM | 368 | 390 | 23 | – | – | |
| Phobius | 368 | 386 | 19 | – | – | |
| Phobius | 387 | 391 | 5 | – | – | |
| Phobius | 392 | 412 | 21 | – | – | |
| Phobius | 413 | 432 | 20 | – | – | |
| Phobius | 433 | 452 | 20 | – | – | |
| TMHMM | 433 | 455 | 23 | – | – | |
| Phobius | 453 | 471 | 19 | – | – | |
| TMHMM | 468 | 490 | 23 | – | – | |
| Phobius | 472 | 495 | 24 | – | – | |
| Phobius | 496 | 506 | 11 | – | – | |
| TMHMM | 505 | 527 | 23 | – | – | |
| Phobius | 507 | 532 | 26 | – | – | |
| Phobius | 533 | 543 | 11 | – | – | |
| TMHMM | 540 | 562 | 23 | – | – | |
| Phobius | 544 | 562 | 19 | – | – | |
| Phobius | 563 | 582 | 20 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj5g3v2113480.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj5g3v2113480.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.