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| Field | Value |
|---|---|
| Gene ID | Lj5g3v2179680 |
| Transcript ID | Lj5g3v2179680.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: amino-acid permease BAT1 homolog [Cicer arietinum] gi|502120621|ref|XP_004497025.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 432 | 432 | 1.30E-300 | ||
| Phobius | 1 | 83 | 83 | – | – | |
| PIRSF | 1 | 431 | 431 | 3.10E-50 | ||
| PANTHER | 1 | 432 | 432 | 1.30E-300 | – | |
| Pfam | 2 | 409 | 408 | 1.40E-57 | ||
| TMHMM | 20 | 42 | 23 | – | – | |
| TMHMM | 57 | 79 | 23 | – | – | |
| Phobius | 84 | 110 | 27 | – | – | |
| TMHMM | 86 | 108 | 23 | – | – | |
| Phobius | 111 | 115 | 5 | – | – | |
| TMHMM | 112 | 134 | 23 | – | – | |
| Phobius | 116 | 134 | 19 | – | – | |
| Phobius | 135 | 196 | 62 | – | – | |
| Phobius | 197 | 219 | 23 | – | – | |
| TMHMM | 197 | 219 | 23 | – | – | |
| Phobius | 220 | 248 | 29 | – | – | |
| Phobius | 249 | 270 | 22 | – | – | |
| TMHMM | 252 | 274 | 23 | – | – | |
| Phobius | 271 | 303 | 33 | – | – | |
| Phobius | 304 | 324 | 21 | – | – | |
| TMHMM | 306 | 328 | 23 | – | – | |
| Phobius | 325 | 329 | 5 | – | – | |
| Phobius | 330 | 355 | 26 | – | – | |
| TMHMM | 333 | 355 | 23 | – | – | |
| Phobius | 356 | 366 | 11 | – | – | |
| Phobius | 367 | 391 | 25 | – | – | |
| TMHMM | 367 | 389 | 23 | – | – | |
| Phobius | 392 | 402 | 11 | – | – | |
| Phobius | 403 | 422 | 20 | – | – | |
| TMHMM | 404 | 423 | 20 | – | – | |
| Phobius | 423 | 432 | 10 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj5g3v2179680.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj5g3v2179680.1, powered by CORGI.
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