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| Field | Value |
|---|---|
| Gene ID | Lj5g3v2179700 |
| Transcript ID | Lj5g3v2179700.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | phosphatidic acid phosphatase beta [Vigna unguiculata] gi|10673973|gb|AAF89745.3|AF171230_1 |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 289 | 289 | 7.00E-172 | ||
| Phobius | 1 | 25 | 25 | – | – | |
| PANTHER | 1 | 289 | 289 | 7.00E-172 | – | |
| SUPERFAMILY | 21 | 249 | 229 | 5.23E-37 | ||
| TMHMM | 26 | 48 | 23 | – | – | |
| Phobius | 26 | 46 | 21 | – | – | |
| Phobius | 47 | 65 | 19 | – | – | |
| CDD | 57 | 244 | 188 | 1.63E-82 | – | |
| Phobius | 66 | 89 | 24 | – | – | |
| TMHMM | 68 | 89 | 22 | – | – | |
| Gene3D | 74 | 242 | 169 | 3.50E-26 | ||
| Phobius | 90 | 95 | 6 | – | – | |
| TMHMM | 96 | 118 | 23 | – | – | |
| Phobius | 96 | 114 | 19 | – | – | |
| Pfam | 100 | 245 | 146 | 1.00E-28 | ||
| SMART | 100 | 241 | 142 | 3.20E-24 | ||
| Phobius | 115 | 166 | 52 | – | – | |
| TMHMM | 163 | 182 | 20 | – | – | |
| Phobius | 167 | 183 | 17 | – | – | |
| Phobius | 184 | 194 | 11 | – | – | |
| TMHMM | 194 | 216 | 23 | – | – | |
| Phobius | 195 | 214 | 20 | – | – | |
| Phobius | 215 | 225 | 11 | – | – | |
| TMHMM | 226 | 245 | 20 | – | – | |
| Phobius | 226 | 244 | 19 | – | – | |
| Phobius | 245 | 324 | 80 | – | – | |
| MobiDBLite | 301 | 324 | 24 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of Lj5g3v2179700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj5g3v2179700.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.