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| Field | Value |
|---|---|
| Gene ID | Lj5g3v2260750 |
| Transcript ID | Lj5g3v2260750.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: rae1-like protein At1g80670-like [Cicer arietinum] gi|502118278|ref|XP_004496188.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 154 | 154 | 1.60E-83 | – | |
| MobiDBLite | 1 | 22 | 22 | – | – | |
| PANTHER | 1 | 154 | 154 | 1.60E-83 | – | |
| SMART | 13 | 52 | 40 | 0.016 | ||
| ProSiteProfiles | 20 | 150 | 131 | 24.996 | ||
| Gene3D | 20 | 152 | 133 | 1.90E-30 | ||
| SUPERFAMILY | 22 | 151 | 130 | 3.21E-29 | ||
| Pfam | 25 | 51 | 27 | 0.0028 | ||
| ProSiteProfiles | 25 | 61 | 37 | 8.57 | ||
| PRINTS | 39 | 53 | 15 | 1.30E-05 | ||
| SMART | 61 | 99 | 39 | 5.50E-05 | ||
| ProSiteProfiles | 67 | 108 | 42 | 10.809 | ||
| Pfam | 69 | 98 | 30 | 0.0032 | ||
| PRINTS | 86 | 100 | 15 | 1.30E-05 | ||
| SMART | 102 | 141 | 40 | 1.70E-06 | ||
| ProSiteProfiles | 109 | 150 | 42 | 14.184 | ||
| Pfam | 112 | 141 | 30 | 5.20E-05 | ||
| PRINTS | 128 | 142 | 15 | 1.30E-05 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj5g3v2260750.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj5g3v2260750.1, powered by CORGI.
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