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| Field | Value |
|---|---|
| Gene ID | Lj5g3v2298180 |
| Transcript ID | Lj5g3v2298180.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: probable UDP-sugar transporter protein SLC35A4-like [Glycine max] gi|356536564|ref|XP_003536807.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 39 | 39 | – | – | |
| PANTHER | 15 | 403 | 389 | 1.30E-252 | – | |
| PANTHER | 15 | 403 | 389 | 1.30E-252 | ||
| PIRSF | 20 | 389 | 370 | 4.40E-116 | ||
| TMHMM | 40 | 62 | 23 | – | – | |
| Phobius | 40 | 62 | 23 | – | – | |
| Phobius | 63 | 73 | 11 | – | – | |
| Pfam | 64 | 344 | 281 | 1.90E-28 | ||
| TMHMM | 72 | 94 | 23 | – | – | |
| Phobius | 74 | 94 | 21 | – | – | |
| Phobius | 95 | 105 | 11 | – | – | |
| Phobius | 106 | 130 | 25 | – | – | |
| TMHMM | 107 | 129 | 23 | – | – | |
| SUPERFAMILY | 113 | 193 | 81 | 4.18E-06 | – | |
| Phobius | 131 | 149 | 19 | – | – | |
| TMHMM | 144 | 166 | 23 | – | – | |
| Phobius | 150 | 166 | 17 | – | – | |
| Phobius | 167 | 177 | 11 | – | – | |
| TMHMM | 171 | 188 | 18 | – | – | |
| Phobius | 178 | 195 | 18 | – | – | |
| Phobius | 196 | 200 | 5 | – | – | |
| Phobius | 201 | 223 | 23 | – | – | |
| TMHMM | 203 | 225 | 23 | – | – | |
| Phobius | 224 | 243 | 20 | – | – | |
| Phobius | 244 | 264 | 21 | – | – | |
| TMHMM | 245 | 264 | 20 | – | – | |
| Phobius | 265 | 278 | 14 | – | – | |
| Phobius | 279 | 298 | 20 | – | – | |
| TMHMM | 279 | 298 | 20 | – | – | |
| Phobius | 299 | 309 | 11 | – | – | |
| Phobius | 310 | 327 | 18 | – | – | |
| TMHMM | 319 | 341 | 23 | – | – | |
| Phobius | 328 | 332 | 5 | – | – | |
| Phobius | 333 | 351 | 19 | – | – | |
| Phobius | 352 | 404 | 53 | – | – | |
| MobiDBLite | 379 | 404 | 26 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Golgi membrane | The lipid bilayer surrounding any of the compartments of the Golgi apparatus. | ||
| Molecular function | Pyrimidine nucleotide-sugar transmembrane transporter activity | Enables the transfer of a pyrimidine nucleotide-sugar from one side of a membrane to the other. Pyrimidine nucleotide-sugars are pyrimidine nucleotides in glycosidic linkage with a monosaccharide or monosaccharide derivative. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Biological process | Pyrimidine nucleotide-sugar transmembrane transport | The process in which a pyrimidine nucleotide-sugar is transported across a membrane. Pyrimidine nucleotide-sugars are pyrimidine nucleotides in glycosidic linkage with a monosaccharide or monosaccharide derivative. |
Expression pattern of Lj5g3v2298180.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj5g3v2298180.1, powered by CORGI.
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