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| Field | Value |
|---|---|
| Gene ID | Lj6g3v0027680 |
| Transcript ID | Lj6g3v0027680.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | NADH-quinone oxidoreductase subunit F [Medicago truncatula] gi|357439369|ref|XP_003589961.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 32 | 54 | 23 | – | – | |
| PANTHER | 38 | 477 | 440 | 6.40E-305 | – | |
| SUPERFAMILY | 57 | 293 | 237 | 4.84E-83 | – | |
| TIGRFAM | 61 | 470 | 410 | 1.60E-190 | ||
| Pfam | 100 | 269 | 170 | 4.10E-45 | ||
| ProSitePatterns | 220 | 235 | 16 | – | ||
| SUPERFAMILY | 294 | 379 | 86 | 6.02E-24 | – | |
| Pfam | 296 | 345 | 50 | 4.50E-08 | ||
| SUPERFAMILY | 380 | 473 | 94 | 4.84E-35 | – | |
| SMART | 384 | 429 | 46 | 1.40E-24 | ||
| Pfam | 386 | 468 | 83 | 7.50E-29 | ||
| ProSitePatterns | 397 | 408 | 12 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | NADH dehydrogenase (ubiquinone) activity | Catalysis of the reaction: NADH + H+ + ubiquinone = NAD+ + ubiquinol. | ||
| Molecular function | FMN binding | Interacting selectively and non-covalently with flavin mono nucleotide. Flavin mono nucleotide (FMN) is the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes. | ||
| Molecular function | Oxidoreductase activity, acting on NAD(P)H | Catalysis of an oxidation-reduction (redox) reaction in which NADH or NADPH acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor. | ||
| Molecular function | NAD binding | Interacting selectively and non-covalently with nicotinamide adenine dinucleotide, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NAD+, or the reduced form, NADH. | ||
| Molecular function | 4 iron, 4 sulfur cluster binding | Interacting selectively and non-covalently with a 4 iron, 4 sulfur (4Fe-4S) cluster; this cluster consists of four iron atoms, with the inorganic sulfur atoms found between the irons and acting as bridging ligands. | ||
| Biological process | Oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |
Expression pattern of Lj6g3v0027680.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj6g3v0027680.1, powered by CORGI.
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