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Lj6g3v0485150.1

Overview

Field Value
Gene ID Lj6g3v0485150
Transcript ID Lj6g3v0485150.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: protein IQ-DOMAIN 14-like isoform X3 [Cicer arietinum] gi|502138683|ref|XP_004503494.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR32295:SF22
1 312 312 3.10E-151 –
PANTHER
PTHR32295
1 312 312 3.10E-151 –
SMART
SM00015
6 28 23 0.0014
IPR000048
ProSiteProfiles
PS50096
7 35 29 10.786
IPR000048
Pfam
PF00612
10 28 19 6.80E-06
IPR000048
SMART
SM00015
29 50 22 32
IPR000048
ProSiteProfiles
PS50096
31 58 28 8.919
IPR000048
Pfam
PF00612
34 48 15 0.0029
IPR000048
MobiDBLite
mobidb-lite
108 179 72 – –
Pfam
PF13178
197 280 84 2.70E-14
IPR025064
MobiDBLite
mobidb-lite
244 264 21 – –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0005515
Molecular function Protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
Subterm of

Genome browser

LORE1 insertions 12

Expression data

Expression pattern

Expression pattern of Lj6g3v0485150.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj6g3v0485150.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.