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Lj6g3v0773820.1

Overview

Field Value
Gene ID Lj6g3v0773820
Transcript ID Lj6g3v0773820.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: probable purine permease 9-like [Glycine max] gi|356527140|ref|XP_003532171.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER 1 377 377 1.50E-205
PANTHER 1 377 377 1.50E-205
Phobius 1 43 43
Phobius 44 68 25
TMHMM 45 67 23
Pfam 49 367 319 3.00E-109
Phobius 69 79 11
Phobius 80 99 20
TMHMM 82 99 18
Phobius 100 118 19
Phobius 119 138 20
TMHMM 119 138 20
Phobius 139 149 11
TMHMM 148 170 23
Phobius 150 168 19
Phobius 169 173 5
Phobius 174 194 21
TMHMM 177 194 18
Phobius 195 208 14
TMHMM 209 228 20
Phobius 209 234 26
Phobius 235 245 11
Phobius 246 267 22
TMHMM 249 271 23
Phobius 268 287 20
TMHMM 286 308 23
Phobius 288 311 24
Phobius 312 316 5
TMHMM 315 337 23
Phobius 317 337 21
Phobius 338 343 6
TMHMM 342 361 20
Phobius 344 361 18
Phobius 362 399 38

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Molecular function Purine nucleoside transmembrane transporter activity Enables the transfer of a purine nucleoside, a purine base covalently bonded to a ribose or deoxyribose sugar, from one side of a membrane to the other.
Cellular component Integral component of membrane The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.

LORE1 insertions 10

Expression data

Expression pattern

Expression pattern of Lj6g3v0773820.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj6g3v0773820.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.