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Lj6g3v0773900.1

Overview

Field Value
Gene ID Lj6g3v0773900
Transcript ID Lj6g3v0773900.1
Related isoforms 1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: probable purine permease 9-like [Glycine max] gi|356527140|ref|XP_003532171.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Phobius 1 78 78
PANTHER 30 423 394 7.20E-224
PANTHER 30 423 394 7.20E-224
Phobius 79 100 22
TMHMM 82 104 23
Pfam 82 401 320 1.10E-118
Phobius 101 111 11
Phobius 112 132 21
TMHMM 114 133 20
Phobius 133 152 20
TMHMM 153 175 23
Phobius 153 177 25
Phobius 178 182 5
TMHMM 179 201 23
Phobius 183 202 20
Phobius 203 208 6
TMHMM 208 227 20
Phobius 209 227 19
Phobius 228 242 15
TMHMM 242 264 23
Phobius 243 263 21
Phobius 264 283 20
TMHMM 284 303 20
Phobius 284 302 19
Phobius 303 321 19
Phobius 322 343 22
TMHMM 323 345 23
Phobius 344 349 6
Phobius 350 370 21
TMHMM 350 372 23
Phobius 371 375 5
Phobius 376 395 20
TMHMM 376 395 20
Phobius 396 427 32
MobiDBLite 406 427 22

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Molecular function Purine nucleoside transmembrane transporter activity Enables the transfer of a purine nucleoside, a purine base covalently bonded to a ribose or deoxyribose sugar, from one side of a membrane to the other.
Cellular component Integral component of membrane The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.

LORE1 insertions 19

Expression data

Expression pattern

Expression pattern of Lj6g3v0773900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj6g3v0773900.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.