Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

Lj6g3v0773900.2

Overview

Field Value
Gene ID Lj6g3v0773900
Transcript ID Lj6g3v0773900.2
Related isoforms 1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: probable purine permease 9-like [Glycine max] gi|356527140|ref|XP_003532171.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER 1 360 360 2.60E-215
PANTHER 1 360 360 2.60E-215
Phobius 1 19 19
Pfam 19 338 320 6.10E-119
TMHMM 19 41 23
Phobius 20 41 22
Phobius 42 46 5
Phobius 47 68 22
TMHMM 51 70 20
Phobius 69 88 20
Phobius 89 114 26
TMHMM 90 112 23
Phobius 115 119 5
TMHMM 116 138 23
Phobius 120 139 20
Phobius 140 145 6
TMHMM 145 164 20
Phobius 146 164 19
Phobius 165 179 15
TMHMM 179 201 23
Phobius 180 200 21
Phobius 201 220 20
Phobius 221 239 19
TMHMM 221 240 20
Phobius 240 258 19
Phobius 259 280 22
TMHMM 260 282 23
Phobius 281 286 6
TMHMM 287 309 23
Phobius 287 307 21
Phobius 308 312 5
TMHMM 313 332 20
Phobius 313 332 20
Phobius 333 364 32
MobiDBLite 343 364 22

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Molecular function Purine nucleoside transmembrane transporter activity Enables the transfer of a purine nucleoside, a purine base covalently bonded to a ribose or deoxyribose sugar, from one side of a membrane to the other.
Cellular component Integral component of membrane The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.

LORE1 insertions 19

Expression data

Expression pattern

Expression pattern of Lj6g3v0773900.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…

Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj6g3v0773900.2, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.