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Lj6g3v0820190.1

Overview

Field Value
Gene ID Lj6g3v0820190
Transcript ID Lj6g3v0820190.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: protein GrpE-like [Cicer arietinum] gi|502128881|ref|XP_004500111.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
SignalP
SignalP-TM_GRAM_POSITIVE
1 20 20 – –
PANTHER
PTHR21237:SF23
1 280 280 9.50E-141 –
PANTHER
PTHR21237
1 280 280 9.50E-141
IPR000740
MobiDBLite
mobidb-lite
63 104 42 – –
Hamap
MF_01151
73 277 205 18.346
IPR000740
Pfam
PF01025
94 276 183 1.50E-48
IPR000740
Coils
Coil
104 131 28 – –
Gene3D
G3DSA:3.90.20.20
111 220 110 2.80E-29
IPR013805
SUPERFAMILY
SSF58014
112 221 110 8.63E-23 –
CDD
cd00446
127 275 149 2.87E-57
IPR000740
PRINTS
PR00773
133 149 17 9.50E-16
IPR000740
Gene3D
G3DSA:2.30.22.10
221 277 57 1.50E-23
IPR009012
SUPERFAMILY
SSF51064
222 277 56 4.18E-17
IPR009012
PRINTS
PR00773
229 244 16 9.50E-16
IPR000740
ProSitePatterns
PS01071
232 275 44 –
IPR000740
PRINTS
PR00773
256 275 20 9.50E-16
IPR000740

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0000774
Molecular function Adenyl-nucleotide exchange factor activity Stimulates the hydrolysis and exchange of adenyl nucleotides by other proteins.
Subterm of
GO:0006457
Biological process Protein folding The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure.
Subterm of
GO:0042803
Molecular function Protein homodimerization activity Interacting selectively and non-covalently with an identical protein to form a homodimer.
Subterm of
GO:0051087
Molecular function Chaperone binding Interacting selectively and non-covalently with a chaperone protein, a class of proteins that bind to nascent or unfolded polypeptides and ensure correct folding or transport.
Subterm of

Genome browser

LORE1 insertions 7

Expression data

Expression pattern

Expression pattern of Lj6g3v0820190.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…

Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj6g3v0820190.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.