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| Field | Value |
|---|---|
| Gene ID | Lj6g3v0830410 |
| Transcript ID | Lj6g3v0830410.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: aspartic proteinase nepenthesin-2-like [Glycine max] gi|356567196|ref|XP_003551807.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 4 | 4 | – | – | |
| SignalP | 1 | 24 | 24 | – | – | |
| SignalP | 1 | 24 | 24 | – | – | |
| Phobius | 1 | 24 | 24 | – | – | |
| PANTHER | 3 | 27 | 25 | 1.00E-118 | ||
| PANTHER | 3 | 27 | 25 | 1.00E-118 | – | |
| Phobius | 5 | 16 | 12 | – | – | |
| Phobius | 17 | 24 | 8 | – | – | |
| Phobius | 25 | 316 | 292 | – | – | |
| PANTHER | 51 | 301 | 251 | 1.00E-118 | – | |
| PANTHER | 51 | 301 | 251 | 1.00E-118 | ||
| Gene3D | 121 | 300 | 180 | 7.40E-39 | ||
| SUPERFAMILY | 129 | 295 | 167 | 3.68E-47 | ||
| Pfam | 134 | 301 | 168 | 3.20E-51 | ||
| ProSiteProfiles | 134 | 316 | 183 | 23.043 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Aspartic-type endopeptidase activity | Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which a water molecule bound by the side chains of aspartic residues at the active center acts as a nucleophile. | ||
| Biological process | Proteolysis | The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds. |
Expression pattern of Lj6g3v0830410.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj6g3v0830410.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.