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| Field | Value |
|---|---|
| Gene ID | Lj6g3v0874290 |
| Transcript ID | Lj6g3v0874290.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | calcium dependent protein kinase 3 [Medicago truncatula] gi|91992434|gb|ABE72958.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 156 | 156 | 3.50E-94 | – | |
| PANTHER | 1 | 156 | 156 | 3.50E-94 | – | |
| SUPERFAMILY | 2 | 148 | 147 | 1.19E-45 | ||
| Gene3D | 2 | 69 | 68 | 7.90E-26 | ||
| ProSiteProfiles | 4 | 39 | 36 | 15.322 | ||
| SMART | 8 | 36 | 29 | 7.80E-06 | ||
| CDD | 9 | 68 | 60 | 1.65E-14 | ||
| Pfam | 9 | 69 | 61 | 3.70E-12 | ||
| ProSitePatterns | 17 | 29 | 13 | – | ||
| Coils | 26 | 46 | 21 | – | – | |
| ProSiteProfiles | 40 | 75 | 36 | 10.301 | ||
| SMART | 44 | 72 | 29 | 0.053 | ||
| ProSitePatterns | 53 | 65 | 13 | – | ||
| Gene3D | 76 | 147 | 72 | 6.00E-21 | ||
| ProSiteProfiles | 76 | 111 | 36 | 14.932 | ||
| Pfam | 80 | 148 | 69 | 2.60E-13 | ||
| SMART | 80 | 108 | 29 | 7.90E-04 | ||
| CDD | 80 | 148 | 69 | 1.16E-15 | ||
| ProSitePatterns | 89 | 101 | 13 | – | ||
| ProSiteProfiles | 118 | 153 | 36 | 13.788 | ||
| SMART | 122 | 150 | 29 | 4.90E-07 | ||
| ProSitePatterns | 131 | 143 | 13 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Calcium ion binding | Interacting selectively and non-covalently with calcium ions (Ca2+). |
Expression pattern of Lj6g3v0874290.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj6g3v0874290.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.