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| Field | Value |
|---|---|
| Gene ID | Lj6g3v0874290 |
| Transcript ID | Lj6g3v0874290.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | protein kinase [Medicago sativa] gi|13561063|emb|CAA65500.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 185 | 185 | 4.80E-116 | – | |
| PANTHER | 1 | 185 | 185 | 4.80E-116 | – | |
| SUPERFAMILY | 14 | 178 | 165 | 9.06E-46 | ||
| Gene3D | 24 | 178 | 155 | 6.90E-47 | ||
| ProSiteProfiles | 33 | 68 | 36 | 15.322 | ||
| SMART | 37 | 65 | 29 | 7.80E-06 | ||
| CDD | 38 | 97 | 60 | 1.70E-14 | ||
| Pfam | 38 | 98 | 61 | 5.30E-12 | ||
| ProSitePatterns | 46 | 58 | 13 | – | ||
| Coils | 55 | 75 | 21 | – | – | |
| ProSiteProfiles | 69 | 104 | 36 | 10.301 | ||
| SMART | 73 | 101 | 29 | 0.053 | ||
| ProSitePatterns | 82 | 94 | 13 | – | ||
| ProSiteProfiles | 105 | 140 | 36 | 14.932 | ||
| Pfam | 109 | 177 | 69 | 4.00E-13 | ||
| CDD | 109 | 177 | 69 | 1.16E-15 | ||
| SMART | 109 | 137 | 29 | 7.90E-04 | ||
| ProSitePatterns | 118 | 130 | 13 | – | ||
| ProSiteProfiles | 147 | 182 | 36 | 13.788 | ||
| SMART | 151 | 179 | 29 | 4.90E-07 | ||
| ProSitePatterns | 160 | 172 | 13 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Calcium ion binding | Interacting selectively and non-covalently with calcium ions (Ca2+). |
Expression pattern of Lj6g3v0874290.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj6g3v0874290.3, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.