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| Field | Value |
|---|---|
| Gene ID | Lj6g3v0886380 |
| Transcript ID | Lj6g3v0886380.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: F-box/FBD/LRR-repeat protein At4g26340-like [Glycine max] gi|356527370|ref|XP_003532284.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| ProSiteProfiles | 2 | 50 | 49 | 10.478 | ||
| PANTHER | 3 | 377 | 375 | 3.70E-86 | – | |
| Gene3D | 3 | 54 | 52 | 1.10E-20 | ||
| SUPERFAMILY | 3 | 45 | 43 | 2.88E-13 | ||
| PANTHER | 3 | 377 | 375 | 3.70E-86 | – | |
| Pfam | 4 | 41 | 38 | 7.20E-08 | ||
| SMART | 8 | 48 | 41 | 4.00E-05 | ||
| Gene3D | 91 | 190 | 100 | 1.10E-20 | ||
| SUPERFAMILY | 106 | 284 | 179 | 9.81E-12 | – | |
| TMHMM | 112 | 134 | 23 | – | – | |
| Pfam | 151 | 176 | 26 | 2.70E-05 | ||
| Gene3D | 236 | 282 | 47 | 1.10E-20 | ||
| Pfam | 300 | 343 | 44 | 9.10E-13 | ||
| SMART | 304 | 377 | 74 | 3.80E-09 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj6g3v0886380.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj6g3v0886380.1, powered by CORGI.
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