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| Field | Value |
|---|---|
| Gene ID | Lj6g3v1093480 |
| Transcript ID | Lj6g3v1093480.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: protein MEI2-like 2-like [Glycine max] gi|356556525|ref|XP_003546575.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 722 | 722 | – | – | |
| MobiDBLite | 1 | 40 | 40 | – | – | |
| PANTHER | 88 | 106 | 19 | 1.70E-157 | – | |
| PANTHER | 88 | 106 | 19 | 1.70E-157 | – | |
| PANTHER | 191 | 307 | 117 | 1.70E-157 | – | |
| PANTHER | 191 | 307 | 117 | 1.70E-157 | – | |
| SUPERFAMILY | 191 | 354 | 164 | 1.35E-32 | ||
| Gene3D | 192 | 277 | 86 | 1.30E-18 | ||
| CDD | 193 | 269 | 77 | 1.53E-50 | – | |
| ProSiteProfiles | 194 | 267 | 74 | 14.095 | ||
| SMART | 195 | 263 | 69 | 7.90E-12 | ||
| Pfam | 196 | 260 | 65 | 5.40E-11 | ||
| CDD | 278 | 348 | 71 | 2.60E-44 | – | |
| ProSiteProfiles | 279 | 352 | 74 | 14.658 | ||
| Gene3D | 280 | 362 | 83 | 6.40E-18 | ||
| SMART | 280 | 348 | 69 | 3.20E-14 | ||
| Pfam | 281 | 346 | 66 | 4.50E-12 | ||
| MobiDBLite | 343 | 375 | 33 | – | – | |
| MobiDBLite | 493 | 550 | 58 | – | – | |
| Gene3D | 676 | 749 | 74 | 6.30E-04 | ||
| PANTHER | 679 | 768 | 90 | 1.70E-157 | – | |
| PANTHER | 679 | 768 | 90 | 1.70E-157 | – | |
| Pfam | 679 | 775 | 97 | 6.40E-54 | ||
| SMART | 681 | 757 | 77 | 2.6 | ||
| SUPERFAMILY | 681 | 765 | 85 | 1.30E-14 | ||
| CDD | 682 | 767 | 86 | 5.86E-63 | – | |
| Phobius | 723 | 740 | 18 | – | – | |
| Phobius | 741 | 845 | 105 | – | – | |
| PANTHER | 787 | 801 | 15 | 1.70E-157 | – | |
| PANTHER | 787 | 801 | 15 | 1.70E-157 | – | |
| MobiDBLite | 825 | 845 | 21 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Nucleic acid binding | Interacting selectively and non-covalently with any nucleic acid. |
Expression pattern of Lj6g3v1093480.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj6g3v1093480.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.