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Lj6g3v1126270.1

Overview

Field Value
Gene ID Lj6g3v1126270
Transcript ID Lj6g3v1126270.1
Lotus japonicus genome version MG20 v3.0
Description S-adenosylmethionine synthetase [Cajanus cajan] gi|374095594|gb|AEY85025.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR11964:SF16
1 389 389 0 –
PIRSF
PIRSF000497
1 393 393 3.10E-163
IPR002133
PANTHER
PTHR11964
1 389 389 0
IPR002133
Hamap
MF_00086
4 394 391 50.597
IPR002133
SUPERFAMILY
SSF55973
5 111 107 3.73E-47
IPR022636
Pfam
PF00438
6 103 98 7.80E-43
IPR022628
TIGRFAM
TIGR01034
7 387 381 2.50E-165
IPR002133
Gene3D
G3DSA:3.30.300.10
13 140 128 1.70E-51 –
SUPERFAMILY
SSF55973
117 241 125 2.16E-52
IPR022636
Pfam
PF02772
119 240 122 6.00E-46
IPR022629
ProSitePatterns
PS00376
121 131 11 –
IPR022631
Gene3D
G3DSA:3.30.300.10
141 242 102 3.00E-49 –
Pfam
PF02773
242 382 141 5.30E-62
IPR022630
SUPERFAMILY
SSF55973
242 391 150 1.69E-61
IPR022636
Gene3D
G3DSA:3.30.300.10
253 390 138 5.10E-61 –
ProSitePatterns
PS00377
268 276 9 –
IPR022631

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004478
Molecular function Methionine adenosyltransferase activity Catalysis of the reaction: ATP + L-methionine + H2O = phosphate + diphosphate + S-adenosyl-L-methionine.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006556
Biological process S-adenosylmethionine biosynthetic process The chemical reactions and pathways resulting in the formation of S-adenosylmethionine, S-(5'-adenosyl)-L-methionine, an important intermediate in one-carbon metabolism.
Subterm of

Genome browser

LORE1 insertions 14

Expression data

Expression pattern

Expression pattern of Lj6g3v1126270.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj6g3v1126270.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.