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| Field | Value |
|---|---|
| Gene ID | Lj6g3v1162910 |
| Transcript ID | Lj6g3v1162910.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: respiratory burst oxidase homolog protein E-like isoform X1 [Cicer arietinum] gi|502086189|ref|XP_004488138.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 173 | 173 | 1.80E-182 | – | |
| PANTHER | 1 | 173 | 173 | 1.80E-182 | – | |
| SFLD | 1 | 264 | 264 | 0 | – | |
| SFLD | 3 | 173 | 171 | 1.40E-39 | – | |
| ProSiteProfiles | 21 | 141 | 121 | 14.327 | ||
| SUPERFAMILY | 23 | 138 | 116 | 9.85E-20 | ||
| Pfam | 24 | 138 | 115 | 7.90E-31 | ||
| Gene3D | 24 | 116 | 93 | 7.20E-16 | – | |
| CDD | 30 | 260 | 231 | 6.77E-50 | – | |
| PRINTS | 127 | 140 | 14 | 6.00E-09 | ||
| SUPERFAMILY | 128 | 173 | 46 | 4.99E-09 | – | |
| Pfam | 145 | 266 | 122 | 1.50E-27 | ||
| Gene3D | 147 | 170 | 24 | 1.10E-07 | – | |
| PRINTS | 150 | 167 | 18 | 6.00E-09 | ||
| MobiDBLite | 173 | 207 | 35 | – | – | |
| PANTHER | 204 | 265 | 62 | 1.80E-182 | – | |
| PANTHER | 204 | 265 | 62 | 1.80E-182 | – | |
| Gene3D | 209 | 259 | 51 | 1.10E-07 | – | |
| SUPERFAMILY | 211 | 252 | 42 | 4.99E-09 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Oxidoreductase activity | Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced. | ||
| Biological process | Oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |
Expression pattern of Lj6g3v1162910.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj6g3v1162910.3, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.