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Lj6g3v1313070.1

Overview

Field Value
Gene ID Lj6g3v1313070
Transcript ID Lj6g3v1313070.1
Related isoforms 1
Lotus japonicus genome version MG20 v3.0
Description Solute carrier family 35 member E3 [Medicago truncatula] gi|357449677|ref|XP_003595115.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER 1 355 355 1.60E-241
Phobius 1 53 53
PANTHER 1 355 355 1.60E-241
Phobius 54 72 19
TMHMM 55 77 23
Phobius 73 83 11
Phobius 84 103 20
TMHMM 84 106 23
Phobius 104 122 19
TMHMM 121 139 19
Phobius 123 141 19
Phobius 142 147 6
TMHMM 146 168 23
Phobius 148 167 20
Phobius 168 178 11
TMHMM 178 200 23
Phobius 179 198 20
Phobius 199 209 11
TMHMM 207 229 23
Phobius 210 229 20
Phobius 230 248 19
TMHMM 244 266 23
Phobius 249 270 22
Phobius 271 276 6
TMHMM 273 295 23
Phobius 277 295 19
Phobius 296 300 5
TMHMM 300 322 23
Phobius 301 322 22
Phobius 323 360 38
MobiDBLite 328 360 33

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

Unable to find any GO terms for the transcript with the identifier.

Expression data

Expression pattern

Expression pattern of Lj6g3v1313070.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj6g3v1313070.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.