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| Field | Value |
|---|---|
| Gene ID | Lj6g3v1721620 |
| Transcript ID | Lj6g3v1721620.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: SNF1-related protein kinase regulatory subunit beta-2-like [Glycine max] gi|356555761|ref|XP_003546198.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 63 | 63 | – | – | |
| PANTHER | 45 | 291 | 247 | 1.00E-104 | – | |
| PANTHER | 45 | 291 | 247 | 1.00E-104 | ||
| SUPERFAMILY | 105 | 190 | 86 | 9.80E-23 | ||
| Pfam | 105 | 185 | 81 | 6.00E-31 | ||
| CDD | 106 | 182 | 77 | 4.04E-27 | – | |
| SUPERFAMILY | 188 | 289 | 102 | 3.79E-29 | – | |
| SMART | 200 | 290 | 91 | 3.50E-26 | ||
| Pfam | 218 | 288 | 71 | 8.00E-20 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Biological process | Response to sucrose | Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a sucrose stimulus. | ||
| Biological process | Cellular response to nitrogen levels | Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus reflecting the presence, absence, or concentration of inorganic nitrogen. |
Expression pattern of Lj6g3v1721620.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj6g3v1721620.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.