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Lj6g3v1764540.1

Overview

Field Value
Gene ID Lj6g3v1764540
Transcript ID Lj6g3v1764540.1
Related isoforms 1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: rho GDP-dissociation inhibitor 1-like [Glycine max] gi|356555726|ref|XP_003546181.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
MobiDBLite
mobidb-lite
31 91 61 – –
PANTHER
PTHR10980:SF18
32 262 231 5.40E-161 –
PANTHER
PTHR10980
32 262 231 5.40E-161
IPR000406
SUPERFAMILY
SSF81296
74 263 190 1.43E-68
IPR014756
Pfam
PF02115
75 261 187 2.40E-81
IPR000406
Gene3D
G3DSA:2.70.50.30
87 263 177 1.10E-74
IPR024792
PRINTS
PR00492
182 198 17 1.90E-06
IPR000406
PRINTS
PR00492
199 214 16 1.90E-06
IPR000406
PRINTS
PR00492
241 258 18 1.90E-06
IPR000406

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0005094
Molecular function Rho GDP-dissociation inhibitor activity Prevents the dissociation of GDP from the small GTPase Rho, thereby preventing GTP from binding.
Subterm of
GO:0005737
Cellular component Cytoplasm All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
Subterm of

Genome browser

LORE1 insertions 15

Expression data

Expression pattern

Expression pattern of Lj6g3v1764540.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj6g3v1764540.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.