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Lj6g3v1765570.1

Overview

Field Value
Gene ID Lj6g3v1765570
Transcript ID Lj6g3v1765570.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: acyl-CoA--sterol O-acyltransferase 1-like [Cicer arietinum] gi|502079300|ref|XP_004486217.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER 1 215 215 8.80E-103
Phobius 1 6 6
PANTHER 1 215 215 8.80E-103
Phobius 7 29 23
TMHMM 7 29 23
Phobius 30 34 5
Phobius 35 51 17
TMHMM 44 66 23
Phobius 52 62 11
Phobius 63 80 18
Phobius 81 85 5
Phobius 86 103 18
Phobius 104 123 20
TMHMM 124 143 20
Phobius 124 143 20
Phobius 144 154 11
TMHMM 153 172 20
Phobius 155 173 19
Phobius 174 215 42

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

Unable to find any GO terms for the transcript with the identifier.

Expression data

Expression pattern

Expression pattern of Lj6g3v1765570.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj6g3v1765570.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.