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| Field | Value |
|---|---|
| Gene ID | Lj6g3v1918240 |
| Transcript ID | Lj6g3v1918240.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Tubby-like F-box protein [Medicago truncatula] gi|357447461|ref|XP_003594006.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 391 | 391 | 5.60E-291 | – | |
| PANTHER | 1 | 391 | 391 | 5.60E-291 | – | |
| SUPERFAMILY | 32 | 83 | 52 | 2.45E-05 | ||
| Gene3D | 35 | 83 | 49 | 5.50E-06 | – | |
| Pfam | 38 | 91 | 54 | 1.40E-09 | ||
| SUPERFAMILY | 88 | 391 | 304 | 4.45E-102 | ||
| Gene3D | 98 | 385 | 288 | 1.40E-92 | ||
| Pfam | 103 | 385 | 283 | 4.70E-94 | ||
| PRINTS | 154 | 170 | 17 | 2.30E-79 | ||
| PRINTS | 170 | 194 | 25 | 2.30E-79 | ||
| PRINTS | 219 | 246 | 28 | 2.30E-79 | ||
| PRINTS | 303 | 320 | 18 | 2.30E-79 | ||
| ProSitePatterns | 321 | 334 | 14 | – | ||
| PRINTS | 321 | 337 | 17 | 2.30E-79 | ||
| PRINTS | 348 | 367 | 20 | 2.30E-79 | ||
| PRINTS | 369 | 391 | 23 | 2.30E-79 | ||
| ProSitePatterns | 376 | 391 | 16 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj6g3v1918240.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj6g3v1918240.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.