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| Field | Value |
|---|---|
| Gene ID | Lj6g3v1918250 |
| Transcript ID | Lj6g3v1918250.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: inactive beta-amylase 9-like [Glycine max] gi|356549058|ref|XP_003542915.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 535 | 535 | 0 | – | |
| PANTHER | 1 | 535 | 535 | 0 | – | |
| Gene3D | 84 | 527 | 444 | 3.40E-166 | ||
| SUPERFAMILY | 87 | 519 | 433 | 2.17E-161 | ||
| Pfam | 92 | 492 | 401 | 3.60E-80 | ||
| PRINTS | 123 | 137 | 15 | 1.90E-34 | ||
| PRINTS | 144 | 162 | 19 | 1.90E-34 | ||
| PRINTS | 253 | 275 | 23 | 1.90E-34 | ||
| PRINTS | 326 | 345 | 20 | 1.90E-34 | ||
| PRINTS | 362 | 378 | 17 | 1.90E-34 | ||
| PRINTS | 379 | 390 | 12 | 1.90E-34 | ||
| PRINTS | 397 | 420 | 24 | 1.90E-34 | ||
| PRINTS | 434 | 456 | 23 | 1.90E-34 | ||
| MobiDBLite | 509 | 538 | 30 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Polysaccharide catabolic process | The chemical reactions and pathways resulting in the breakdown of a polysaccharide, a polymer of many (typically more than 10) monosaccharide residues linked glycosidically. | ||
| Molecular function | Beta-amylase activity | Catalysis of the reaction: (1,4-alpha-D-glucosyl)(n+1) + H2O = (1,4-alpha-D-glucosyl)(n-1) + alpha-maltose. This reaction is the hydrolysis of 1,4-alpha-glucosidic linkages in polysaccharides so as to remove successive maltose units from the non-reducing ends of the chains. |
Expression pattern of Lj6g3v1918250.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj6g3v1918250.1, powered by CORGI.
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