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| Field | Value |
|---|---|
| Gene ID | Lj6g3v1934040 |
| Transcript ID | Lj6g3v1934040.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: phospho-N-acetylmuramoyl-pentapeptide-transferase homolog [Cicer arietinum] gi|502078714|ref|XP_004486032.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 142 | 142 | – | – | |
| TMHMM | 143 | 162 | 20 | – | – | |
| Phobius | 143 | 162 | 20 | – | – | |
| PANTHER | 154 | 455 | 302 | 1.20E-119 | ||
| PANTHER | 154 | 455 | 302 | 1.20E-119 | – | |
| Phobius | 163 | 181 | 19 | – | – | |
| Phobius | 182 | 204 | 23 | – | – | |
| TMHMM | 182 | 204 | 23 | – | – | |
| Phobius | 205 | 224 | 20 | – | – | |
| Phobius | 225 | 245 | 21 | – | – | |
| TMHMM | 225 | 244 | 20 | – | – | |
| Phobius | 246 | 250 | 5 | – | – | |
| Phobius | 251 | 271 | 21 | – | – | |
| TMHMM | 254 | 273 | 20 | – | – | |
| Pfam | 254 | 419 | 166 | 2.00E-18 | ||
| Phobius | 272 | 282 | 11 | – | – | |
| Phobius | 283 | 301 | 19 | – | – | |
| Phobius | 302 | 320 | 19 | – | – | |
| TMHMM | 320 | 342 | 23 | – | – | |
| Phobius | 321 | 340 | 20 | – | – | |
| Phobius | 341 | 351 | 11 | – | – | |
| Phobius | 352 | 370 | 19 | – | – | |
| TMHMM | 357 | 379 | 23 | – | – | |
| Phobius | 371 | 375 | 5 | – | – | |
| Phobius | 376 | 393 | 18 | – | – | |
| Phobius | 394 | 399 | 6 | – | – | |
| TMHMM | 400 | 422 | 23 | – | – | |
| Phobius | 400 | 419 | 20 | – | – | |
| Phobius | 420 | 424 | 5 | – | – | |
| Phobius | 425 | 448 | 24 | – | – | |
| TMHMM | 426 | 448 | 23 | – | – | |
| Phobius | 449 | 455 | 7 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Phospho-N-acetylmuramoyl-pentapeptide-transferase activity | Catalysis of the reaction: UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-L-lysyl-D-alanyl-D-alanine + undecaprenyl phosphate = UMP + N-acetylmuramoyl-L-alanyl-D-glutamyl-L-lysyl-D-alanyl-D-alanine-diphosphoundecaprenol. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
Expression pattern of Lj6g3v1934040.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj6g3v1934040.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.