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Lj6g3v2041880.1

Overview

Field Value
Gene ID Lj6g3v2041880
Transcript ID Lj6g3v2041880.1
Lotus japonicus genome version MG20 v3.0
Description Uncharacterized protein TCM_029873 [Theobroma cacao] gi|508780992|gb|EOY28248.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER 1 781 781 0
Phobius 1 482 482
PANTHER 1 781 781 0
Pfam 2 759 758 2.10E-253
TMHMM 481 503 23
Phobius 483 504 22
Phobius 505 509 5
TMHMM 510 532 23
Phobius 510 532 23
Phobius 533 560 28
Phobius 561 582 22
Phobius 583 601 19
TMHMM 600 622 23
Phobius 602 622 21
Phobius 623 683 61
TMHMM 684 703 20
Phobius 684 703 20
Phobius 704 730 27
TMHMM 728 750 23
Phobius 731 750 20
Phobius 751 781 31

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

Unable to find any GO terms for the transcript with the identifier.

LORE1 insertions 6

Expression data

Expression pattern

Expression pattern of Lj6g3v2041880.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…

Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj6g3v2041880.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.