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| Field | Value |
|---|---|
| Gene ID | Lj6g3v2080320 |
| Transcript ID | Lj6g3v2080320.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Uncharacterized protein isoform 1 [Theobroma cacao] gi|508722293|gb|EOY14190.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 38 | 38 | – | – | |
| PANTHER | 2 | 180 | 179 | 3.50E-42 | ||
| Pfam | 10 | 160 | 151 | 4.90E-10 | ||
| Phobius | 39 | 59 | 21 | – | – | |
| TMHMM | 39 | 61 | 23 | – | – | |
| Phobius | 60 | 64 | 5 | – | – | |
| TMHMM | 65 | 87 | 23 | – | – | |
| Phobius | 65 | 85 | 21 | – | – | |
| Phobius | 86 | 96 | 11 | – | – | |
| Phobius | 97 | 118 | 22 | – | – | |
| TMHMM | 99 | 121 | 23 | – | – | |
| Phobius | 119 | 147 | 29 | – | – | |
| TMHMM | 141 | 163 | 23 | – | – | |
| Phobius | 148 | 171 | 24 | – | – | |
| Phobius | 172 | 180 | 9 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Endoplasmic reticulum membrane | The lipid bilayer surrounding the endoplasmic reticulum. | ||
| Biological process | Endoplasmic reticulum organization | A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the endoplasmic reticulum. |
Expression pattern of Lj6g3v2080320.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj6g3v2080320.1, powered by CORGI.
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