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| Field | Value |
|---|---|
| Gene ID | Lj6g3v2192120 |
| Transcript ID | Lj6g3v2192120.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Oligopeptide transporter [Medicago truncatula] gi|357446051|ref|XP_003593303.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 77 | 77 | – | – | |
| PANTHER | 19 | 566 | 548 | 0 | – | |
| PANTHER | 19 | 566 | 548 | 0 | – | |
| TIGRFAM | 53 | 565 | 513 | 1.90E-136 | ||
| TIGRFAM | 57 | 566 | 510 | 1.40E-145 | ||
| Pfam | 73 | 566 | 494 | 2.10E-138 | ||
| TMHMM | 74 | 96 | 23 | – | – | |
| Phobius | 78 | 97 | 20 | – | – | |
| Phobius | 98 | 102 | 5 | – | – | |
| TMHMM | 103 | 125 | 23 | – | – | |
| Phobius | 103 | 125 | 23 | – | – | |
| Phobius | 126 | 183 | 58 | – | – | |
| TMHMM | 150 | 172 | 23 | – | – | |
| Phobius | 184 | 204 | 21 | – | – | |
| TMHMM | 185 | 207 | 23 | – | – | |
| Phobius | 205 | 215 | 11 | – | – | |
| Phobius | 216 | 233 | 18 | – | – | |
| Phobius | 234 | 244 | 11 | – | – | |
| Phobius | 245 | 278 | 34 | – | – | |
| TMHMM | 254 | 276 | 23 | – | – | |
| Phobius | 279 | 289 | 11 | – | – | |
| TMHMM | 288 | 310 | 23 | – | – | |
| Phobius | 290 | 310 | 21 | – | – | |
| Phobius | 311 | 316 | 6 | – | – | |
| Phobius | 317 | 342 | 26 | – | – | |
| TMHMM | 320 | 342 | 23 | – | – | |
| Phobius | 343 | 391 | 49 | – | – | |
| TMHMM | 390 | 412 | 23 | – | – | |
| Phobius | 392 | 416 | 25 | – | – | |
| Phobius | 417 | 447 | 31 | – | – | |
| TMHMM | 447 | 469 | 23 | – | – | |
| Phobius | 448 | 469 | 22 | – | – | |
| Phobius | 470 | 474 | 5 | – | – | |
| Phobius | 475 | 496 | 22 | – | – | |
| TMHMM | 476 | 498 | 23 | – | – | |
| Phobius | 497 | 566 | 70 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj6g3v2192120.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj6g3v2192120.1, powered by CORGI.
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